RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 HMGB1P09429 215 aaKnown RBP23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CATIPQ7Z7H3 387 aa23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 NPLOC4Q8TAT6 608 aa23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TRIB2Q92519 343 aa23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 APBA2Q99767 749 aa23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 BIN2Q9UBW5 565 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF10B-204ENST00000519028 ICAM1P05362 532 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 GRM4Q14833 912 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CCL14Q16627 93 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 DPP9Q86TI2 863 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CHST13Q8NET6 341 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 MMP19Q99542 508 aa23.86■■□□□ 1.41
TNFRSF10B-204ENST00000519028 ZNF236Q9UL36 1845 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 SMCHD1A6NHR9 2005 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 KLRF2D3W0D1 207 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 INHAP05111 366 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CPA1P15085 419 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 KCTD2Q14681 263 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 MTFR1Q15390 333 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TRMT44Q8IYL2 757 aaKnown RBP23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 ZNF654Q8IZM8 581 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TCEANC2Q96MN5 208 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 JAKMIP1Q96N16 626 aaKnown RBP23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 MAP3K14Q99558 947 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 FLRT1Q9NZU1 646 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 FBXO40Q9UH90 709 aa23.85■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CCDC69A6NI79 296 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 MYCP01106 439 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 IGHA2P01877 340 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 HMGCRP04035 888 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 UBXN2AP68543 259 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TRIM32Q13049 653 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TKFCQ3LXA3 575 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 NFXL1Q6ZNB6 911 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 SGMS1Q86VZ5 419 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TRERF1Q96PN7 1200 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 JMJD4Q9H9V9 463 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 HOMER2Q9NSB8 354 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 CCPG1Q9ULG6 757 aa23.84■■□□□ 1.41
TNFRSF10B-204ENST00000519028 BRCA2P51587 3418 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 DDAH1O94760 285 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 SEC24BO95487 1268 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 PGK2P07205 417 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 ALAS1P13196 640 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 NUP133Q8WUM0 1156 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 MYL10Q9BUA6 226 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 VAT1LQ9HCJ6 419 aa23.83■■□□□ 1.41
TNFRSF10B-204ENST00000519028 TAL1P17542 331 aaPredicted RBP23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 PSMA5P28066 241 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 SLC35G1Q2M3R5 365 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 ZNF792Q3KQV3 632 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 MUM1L1Q5H9M0 696 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 ACAD9Q9H845 621 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RNF146Q9NTX7 359 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 SLC5A4Q9NY91 659 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
TNFRSF10B-204ENST00000519028 DNAJC25-GNG10A0A024R161 153 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CCL5P13501 91 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CDC37Q16543 378 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 BLOC1S2Q6QNY1 142 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 ANKRD35Q8N283 1001 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 MTMR8Q96EF0 704 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 DDX11Q96FC9 970 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RIOX1Q9H6W3 641 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 DIS3Q9Y2L1 958 aaKnown RBP23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 SLC12A7Q9Y666 1083 aa23.81■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CASTP20810 708 aaKnown RBP23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RPS6KB1P23443 525 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 SOX10P56693 466 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 MAP3K21Q5TCX8 1036 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 OLFML2BQ68BL8 750 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 MAML3Q96JK9 1138 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 TMEM106CQ9BVX2 250 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 UNC93B1Q9H1C4 597 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 ZSWIM6Q9HCJ5 1215 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 PNMA2Q9UL42 364 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 BRPF3Q9ULD4 1205 aa23.8■■□□□ 1.4
TNFRSF10B-204ENST00000519028 POTEFA5A3E0 1075 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CYTH3O43739 400 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 DHX16O60231 1041 aaKnown RBP23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CALM1P0DP23 149 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CALM2P0DP24 149 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CALM3P0DP25 149 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CACNB2Q08289 660 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 QRICH1Q2TAL8 776 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 FBXL16Q8N461 479 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CTCFLQ8NI51 663 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RNF208Q9H0X6 261 aa23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 A1CFQ9NQ94 594 aaKnown RBP23.79■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RXRAP19793 462 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 KIF5BP33176 963 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 Q6ZUG5 572 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RUFY3Q7L099 469 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 FANCBQ8NB91 859 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 CLEC4DQ8WXI8 215 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 TM6SF1Q9BZW5 370 aa23.78■■□□□ 1.4
TNFRSF10B-204ENST00000519028 RPTORQ8N122 1335 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms