RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 GMCL1Q96IK5 515 aa16.72■□□□□ 0.27
TSNARE1-203ENST00000518928 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
TSNARE1-203ENST00000518928 LCTP09848 1927 aa16.72■□□□□ 0.27
TSNARE1-203ENST00000518928 FRMPD2Q68DX3 1309 aaPredicted RBP16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 MSCO60682 206 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 RTP1P59025 263 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 MUM1L1Q5H9M0 696 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 PRR12Q9ULL5 1215 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 SYNPO2Q9UMS6 1093 aa16.71■□□□□ 0.27
TSNARE1-203ENST00000518928 STAT2P52630 851 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 STAG1Q8WVM7 1258 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 ZKSCAN3Q9BRR0 538 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 ZMYM6O95789 1325 aa16.7■□□□□ 0.26
TSNARE1-203ENST00000518928 LTBP2Q14767 1821 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 TMEM63BQ5T3F8 832 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 SLC39A5Q6ZMH5 540 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■■■■■ 61.7
TSNARE1-203ENST00000518928 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 XPNPEP3Q9NQH7 507 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 ATP11BQ9Y2G3 1177 aa16.69■□□□□ 0.26
TSNARE1-203ENST00000518928 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 ADAMTS4O75173 837 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 COPB2P35606 906 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 CCDC96Q2M329 555 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 MAMDC4Q6UXC1 1216 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 ANKRD35Q8N283 1001 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 CTDP1Q9Y5B0 961 aaPredicted RBP16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 SYNRGQ9UMZ2 1314 aa16.68■□□□□ 0.26
TSNARE1-203ENST00000518928 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 KBTBD13C9JR72 458 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 SGSM2O43147 1006 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 ALAS1P13196 640 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 ITGB8P26012 769 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 BMP8BP34820 402 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 ARMCX2Q7L311 632 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 RAD50Q92878 1312 aa16.67■□□□□ 0.26
TSNARE1-203ENST00000518928 TRIM43BA6NCK2 446 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 RARBP10826 455 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 PDHBP11177 359 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 OAZ1P54368 228 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 PTH1RQ03431 593 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 SNX17Q15036 470 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 FAM160B2Q86V87 743 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 CHST13Q8NET6 341 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 TRIM43Q96BQ3 446 aaPredicted RBP16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 UBE2OQ9C0C9 1292 aaKnown RBP16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 PHF24Q9UPV7 400 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
TSNARE1-203ENST00000518928 NFIBO00712 420 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 CTAGE5O15320 804 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 PLA2G6O60733 806 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 TOP1P11387 765 aaKnown RBP16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 AKR1A1P14550 325 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 CCDC144BQ3MJ40 725 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 CCSAPQ6IQ19 270 aaPredicted RBP16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 Q7L0L9 218 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 PDLIM7Q9NR12 457 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
TSNARE1-203ENST00000518928 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 B4E1Z4 1266 aa16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 KDM4AO75164 1064 aa16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 BTNL9Q6UXG8 535 aa16.64■□□□□ 0.25
TSNARE1-203ENST00000518928 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms