RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RGS13O14921 159 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 VIL1P09327 827 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 NID1P14543 1247 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 ZNF143P52747 638 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 SLC6A19Q695T7 634 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 MORC1Q86VD1 984 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 NIM1KQ8IY84 436 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 CCDC146Q8IYE0 955 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 BTBD6Q96KE9 485 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 DPH2Q9BQC3 489 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 ATXN3LQ9H3M9 355 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 DDX56Q9NY93 547 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 CRIM1Q9NZV1 1036 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 POGKQ9P215 609 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 SUCOQ9UBS9 1254 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 FER1L4A9Z1Z3 1794 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 PTPRUQ92729 1446 aa6.16□□□□□ -1.42
CTNNA1-212ENST00000518919 CDC42BPGQ6DT37 1551 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CCDC163A0A0D9SF12 145 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 ANKRD34BA5PLL1 514 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 IRS4O14654 1257 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 OIP5O43482 229 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 DEAF1O75398 565 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CLEC3AO75596 197 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 TP53P04637 393 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 GBP1P32455 592 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 NTF4P34130 210 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 DUOXA2Q1HG44 320 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 PLEKHG6Q3KR16 790 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 EXOSC6Q5RKV6 272 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CDC37L1Q7L3B6 337 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 KRT26Q7Z3Y9 468 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 WAPLQ7Z5K2 1190 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 TMEM192Q8IY95 271 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 DTWD1Q8N5C7 304 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 KCT2Q8NC54 265 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 RNF214Q8ND24 703 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 SMARCC1Q92922 1105 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 NINJ1Q92982 152 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 PPP1R14AQ96A00 147 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CCDC74BQ96LY2 380 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 FANCD2OSQ96PS1 177 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CDC6Q99741 560 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 CDK19Q9BWU1 502 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 RCAN3Q9UKA8 241 aa6.15□□□□□ -1.42
CTNNA1-212ENST00000518919 KIF20BQ96Q89 1820 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 SHISA8B8ZZ34 492 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 UBOX5O94941 541 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 S100BP04271 92 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 EPHX1P07099 455 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 ADH5P11766 374 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 CEBPAP49715 358 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 NKG7Q16617 165 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 TM4SF20Q53R12 229 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 DUSP27Q5VZP5 1158 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 CHAC2Q8WUX2 184 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 EXOC2Q96KP1 924 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 IPO9Q96P70 1041 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 HAUS7Q99871 368 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 IRF2BPLQ9H1B7 796 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 PIDD1Q9HB75 910 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 ARHGEF4Q9NR80 690 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 CPSF1Q10570 1443 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 TOPAZ1Q8N9V7 1692 aa6.14□□□□□ -1.43
CTNNA1-212ENST00000518919 TRAV20A0A0B4J274 112 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 A0A1W2PQU0 124 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 LCE2BO14633 110 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 APAF1O14727 1248 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 WISP1O95388 367 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 NEFMP07197 916 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 BCRP11274 1271 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 MYCLP1P12525 358 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 LTKP29376 864 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 L1CAMP32004 1257 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 RAC1P63000 192 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 KRT76Q01546 638 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 TTLL4Q14679 1199 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 CT47A1Q5JQC4 288 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 TRAPPC3LQ5T215 181 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 PRAMEF13Q5VWM6 474 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 NUTM2GQ5VZR2 741 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 ACAD11Q709F0 780 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 CCDC144CPQ8IYA2 1237 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 TRMT2AQ8IZ69 625 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 APBA2Q99767 749 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 AARSD1Q9BTE6 412 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms