RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 IFIT3O14879 490 aaKnown RBP21.87■■□□□ 1.09
FAM49B-208ENST00000518344 ALAS1P13196 640 aa21.87■■□□□ 1.09
FAM49B-208ENST00000518344 CNGA1P29973 690 aa21.87■■□□□ 1.09
FAM49B-208ENST00000518344 ANKRD35Q8N283 1001 aa21.87■■□□□ 1.09
FAM49B-208ENST00000518344 MAML3Q96JK9 1138 aa21.87■■□□□ 1.09
FAM49B-208ENST00000518344 RBBP6Q7Z6E9 1792 aaKnown RBP21.87■■□□□ 1.09
FAM49B-208ENST00000518344 ERICH2A1L162 156 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 SLC27A2O14975 620 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 ZNF792Q3KQV3 632 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 GPATCH4Q5T3I0 446 aaKnown RBP21.86■■□□□ 1.09
FAM49B-208ENST00000518344 TRERF1Q96PN7 1200 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
FAM49B-208ENST00000518344 RNF146Q9NTX7 359 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 CCPG1Q9ULG6 757 aa21.86■■□□□ 1.09
FAM49B-208ENST00000518344 SEC23AQ15436 765 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 CREB3L3Q68CJ9 461 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 UBA5Q9GZZ9 404 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 CRISPLD2Q9H0B8 497 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 CPVLQ9H3G5 476 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 ACAD9Q9H845 621 aa21.85■■□□□ 1.09
FAM49B-208ENST00000518344 DIS3Q9Y2L1 958 aaKnown RBP21.85■■□□□ 1.09
FAM49B-208ENST00000518344 FARP2O94887 1054 aaPredicted RBP21.84■■□□□ 1.09
FAM49B-208ENST00000518344 ICAM1P05362 532 aa21.84■■□□□ 1.09
FAM49B-208ENST00000518344 PARP1P09874 1014 aaKnown RBP21.84■■□□□ 1.09
FAM49B-208ENST00000518344 TAL1P17542 331 aaPredicted RBP21.84■■□□□ 1.09
FAM49B-208ENST00000518344 SART3Q15020 963 aaKnown RBP21.84■■□□□ 1.09
FAM49B-208ENST00000518344 NECTIN1Q15223 517 aa21.84■■□□□ 1.09
FAM49B-208ENST00000518344 TKFCQ3LXA3 575 aa21.84■■□□□ 1.09
FAM49B-208ENST00000518344 PRAMEF19Q5SWL8 479 aa21.84■■□□□ 1.09
FAM49B-208ENST00000518344 IGHA2P01877 340 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 CAPN2P17655 700 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 WTAPQ15007 396 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 TMEM67Q5HYA8 995 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 MB21D2Q8IYB1 491 aaPredicted RBP21.83■■□□□ 1.09
FAM49B-208ENST00000518344 TRPV1Q8NER1 839 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 TINF2Q9BSI4 451 aa21.83■■□□□ 1.09
FAM49B-208ENST00000518344 KIAA0100Q14667 2235 aaKnown RBP21.83■■□□□ 1.08
FAM49B-208ENST00000518344 ZNF236Q9UL36 1845 aa21.83■■□□□ 1.08
FAM49B-208ENST00000518344 MUM1L1Q5H9M0 696 aa21.82■■□□□ 1.08
FAM49B-208ENST00000518344 RNF20Q5VTR2 975 aa21.82■■□□□ 1.08
FAM49B-208ENST00000518344 SENP2Q9HC62 589 aa21.82■■□□□ 1.08
FAM49B-208ENST00000518344 DNAJC25-GNG10A0A024R161 153 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 DHX16O60231 1041 aaKnown RBP21.81■■□□□ 1.08
FAM49B-208ENST00000518344 CYBAP13498 195 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 ANTXR2P58335 489 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 LHX8Q68G74 356 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.81■■□□□ 1.08
FAM49B-208ENST00000518344 VAT1LQ9HCJ6 419 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 DDX20Q9UHI6 824 aaKnown RBP21.81■■□□□ 1.08
FAM49B-208ENST00000518344 OGDHLQ9ULD0 1010 aa21.81■■□□□ 1.08
FAM49B-208ENST00000518344 POTEB2H3BUK9 544 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 MCM5P33992 734 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 NSMFQ6X4W1 530 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 UBE2Q1Q7Z7E8 422 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 ADGRF4Q8IZF3 695 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
FAM49B-208ENST00000518344 PAWRQ96IZ0 340 aaKnown RBP21.8■■□□□ 1.08
FAM49B-208ENST00000518344 A1CFQ9NQ94 594 aaKnown RBP21.8■■□□□ 1.08
FAM49B-208ENST00000518344 PRC1O43663 620 aa21.79■■□□□ 1.08
FAM49B-208ENST00000518344 ANO1Q5XXA6 986 aa21.79■■□□□ 1.08
FAM49B-208ENST00000518344 ANKLE1Q8NAG6 615 aa21.79■■□□□ 1.08
FAM49B-208ENST00000518344 IGDCC4Q8TDY8 1250 aa21.79■■□□□ 1.08
FAM49B-208ENST00000518344 DIS3LQ8TF46 1054 aaKnown RBP21.79■■□□□ 1.08
FAM49B-208ENST00000518344 MSCO60682 206 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 CNTN2Q02246 1040 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 CDC37Q16543 378 aaPredicted RBP21.78■■□□□ 1.08
FAM49B-208ENST00000518344 NECAB2Q7Z6G3 386 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 CATIPQ7Z7H3 387 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
FAM49B-208ENST00000518344 MSL3Q8N5Y2 521 aaKnown RBP21.78■■□□□ 1.08
FAM49B-208ENST00000518344 DPF3Q92784 378 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 GPHNQ9NQX3 736 aaPredicted RBP21.78■■□□□ 1.08
FAM49B-208ENST00000518344 PNMA2Q9UL42 364 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 CNPY2Q9Y2B0 182 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 PFASO15067 1338 aa21.78■■□□□ 1.08
FAM49B-208ENST00000518344 KLRF2D3W0D1 207 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 SEPT4O43236 478 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 USH1GQ495M9 461 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 ZNF467Q7Z7K2 595 aaPredicted RBP21.77■■□□□ 1.08
FAM49B-208ENST00000518344 NUP133Q8WUM0 1156 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 JMJD4Q9H9V9 463 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 NRBP1Q9UHY1 535 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 MAD2L2Q9UI95 211 aa21.77■■□□□ 1.08
FAM49B-208ENST00000518344 PALM3A6NDB9 673 aaPredicted RBP21.76■■□□□ 1.07
FAM49B-208ENST00000518344 NFIBO00712 420 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 SNAI1O95863 264 aaPredicted RBP21.76■■□□□ 1.07
FAM49B-208ENST00000518344 COL9A3Q14050 684 aaPredicted RBP21.76■■□□□ 1.07
FAM49B-208ENST00000518344 MAMDC4Q6UXC1 1216 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 NFXL1Q6ZNB6 911 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 RASEFQ8IZ41 740 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 FAM133AQ8N9E0 248 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 HTATIP2Q9BUP3 242 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 CYP39A1Q9NYL5 469 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 WDR19Q8NEZ3 1342 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 SYNGAP1Q96PV0 1343 aa21.76■■□□□ 1.07
FAM49B-208ENST00000518344 PTPDC1A2A3K4 754 aa21.75■■□□□ 1.07
FAM49B-208ENST00000518344 SOWAHBA6NEL2 793 aa21.75■■□□□ 1.07
FAM49B-208ENST00000518344 MYCNP04198 464 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms