RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 ZSWIM5Q9P217 1185 aa17.22■□□□□ 0.35
CDK16-209ENST00000517479 COLQQ9Y215 455 aaPredicted RBP17.22■□□□□ 0.35
CDK16-209ENST00000517479 TRIOBPQ9H2D6 2365 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 SGSM2O43147 1006 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 SEPT4O43236 478 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 EVI5O60447 810 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 ALAS1P13196 640 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 CAPN2P17655 700 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
CDK16-209ENST00000517479 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.353e-6■■■■■ 37.6
CDK16-209ENST00000517479 C7orf61Q8IZ16 206 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 ANKRD35Q8N283 1001 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
CDK16-209ENST00000517479 RANBP17Q9H2T7 1088 aaKnown RBP17.21■□□□□ 0.35
CDK16-209ENST00000517479 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
CDK16-209ENST00000517479 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
CDK16-209ENST00000517479 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 CYP21A2P08686 494 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 ZNF865P0CJ78 1059 aaPredicted RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 TTC14Q96N46 770 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 ACAD9Q9H845 621 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 A1CFQ9NQ94 594 aaKnown RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 RANBP2P49792 3224 aaKnown RBP17.2■□□□□ 0.34
CDK16-209ENST00000517479 ASTN1O14525 1302 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 TNKSO95271 1327 aa17.2■□□□□ 0.34
CDK16-209ENST00000517479 MSCO60682 206 aa17.19■□□□□ 0.34
CDK16-209ENST00000517479 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
CDK16-209ENST00000517479 FDX1P10109 184 aa17.19■□□□□ 0.34
CDK16-209ENST00000517479 LRRC26Q2I0M4 334 aa17.19■□□□□ 0.34
CDK16-209ENST00000517479 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
CDK16-209ENST00000517479 PURBQ96QR8 312 aaKnown RBP17.19■□□□□ 0.34
CDK16-209ENST00000517479 CCPG1Q9ULG6 757 aa17.19■□□□□ 0.34
CDK16-209ENST00000517479 BAZ2BQ9UIF8 2168 aaKnown RBP17.18■□□□□ 0.34
CDK16-209ENST00000517479 ADCY6O43306 1168 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
CDK16-209ENST00000517479 MAMDC4Q6UXC1 1216 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
CDK16-209ENST00000517479 IQCA1Q86XH1 822 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 DGKHQ86XP1 1220 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 FAM133AQ8N9E0 248 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 PNMA1Q8ND90 353 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 SENP6Q9GZR1 1112 aaPredicted RBP17.18■□□□□ 0.34
CDK16-209ENST00000517479 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
CDK16-209ENST00000517479 ZMYND8Q9ULU4 1186 aaPredicted RBP17.18■□□□□ 0.34
CDK16-209ENST00000517479 SOWAHBA6NEL2 793 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 DNM1LO00429 736 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 ICAM1P05362 532 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 SYN1P17600 705 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 ATN1P54259 1190 aaPredicted RBP17.17■□□□□ 0.34
CDK16-209ENST00000517479 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
CDK16-209ENST00000517479 COL9A3Q14050 684 aaPredicted RBP17.17■□□□□ 0.34
CDK16-209ENST00000517479 ANKS1AQ92625 1134 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 KRT23Q9C075 422 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 ZHX1Q9UKY1 873 aaPredicted RBP17.17■□□□□ 0.34
CDK16-209ENST00000517479 NR2E3Q9Y5X4 410 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 SYNGAP1Q96PV0 1343 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
CDK16-209ENST00000517479 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 NFIBO00712 420 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 PGK1P00558 417 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 LRRC41Q15345 812 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 SEC23AQ15436 765 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 ARMCX2Q7L311 632 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 KAT14Q9H8E8 782 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.16■□□□□ 0.34
CDK16-209ENST00000517479 CYP39A1Q9NYL5 469 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
CDK16-209ENST00000517479 NRBP1Q9UHY1 535 aa17.16■□□□□ 0.34
CDK16-209ENST00000517479 PTGS1P23219 599 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 CHST3Q7LGC8 479 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 ZNF467Q7Z7K2 595 aaPredicted RBP17.15■□□□□ 0.34
CDK16-209ENST00000517479 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
CDK16-209ENST00000517479 MAP4K1Q92918 833 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 UBAC1Q9BSL1 405 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 CNPY2Q9Y2B0 182 aa17.15■□□□□ 0.34
CDK16-209ENST00000517479 RBM8AQ9Y5S9 174 aaKnown RBP17.15■□□□□ 0.34
CDK16-209ENST00000517479 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
CDK16-209ENST00000517479 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms