RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 EMC7Q9NPA0 242 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NLRC4Q9NPP4 1024 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 C14orf119Q9NWQ9 140 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 THG1LQ9NWX6 298 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SAGE1Q9NXZ1 904 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 AKT3Q9Y243 479 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GIT1Q9Y2X7 761 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DYRK1BQ9Y463 629 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZNF451Q9Y4E5 1061 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA9Q9Y5G4 932 aaKnown RBP3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA8Q9Y5G5 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA7Q9Y5G6 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA6Q9Y5G7 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA3Q9Y5H0 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHGA2Q9Y5H1 932 aa3.35□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SENP3-EIF4A1A0A087X0R7 540 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ABHD14A-ACY1A0A1B0GW23 586 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 H3BRJ5 948 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CBX4O00257 560 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EXOC5O00471 708 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 NOP56O00567 594 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 XPOTO43592 962 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 AP1G1O43747 822 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 H2AFYO75367 372 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 KCNH1O95259 989 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 AGR2O95994 175 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 U2AF1L5P0DN76 240 aaPredicted RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PTMSP20962 102 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 RECQLP46063 649 aaPredicted RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 KCNJ6P48051 423 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 USP14P54578 494 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 GEMIN4P57678 1058 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ETF1P62495 437 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 U2AF1Q01081 240 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DSG1Q02413 1049 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PDE4BQ07343 736 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TRIM14Q14142 442 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZNF267Q14586 743 aaPredicted RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SART3Q15020 963 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 BBS9Q3SYG4 887 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PPM1JQ5JR12 505 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TMEM240Q5SV17 173 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ZNF280DQ6N043 979 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FIGNL1Q6PIW4 674 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TXNDC11Q6PKC3 985 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 B3GNT9Q6UX72 402 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 USP53Q70EK8 1073 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TRIM59Q8IWR1 403 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CCDC144CPQ8IYA2 1237 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 FAM186BQ8IYM0 893 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CYP4X1Q8N118 509 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 IGSF22Q8N9C0 903 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TMEM145Q8NBT3 493 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 CLRN3Q8NCR9 226 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 C1orf131Q8NDD1 294 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ATXN2LQ8WWM7 1075 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PTPRN2Q92932 1015 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TNIP3Q96KP6 325 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SELENOOQ9BVL4 669 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SLC13A1Q9BZW2 595 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 ADAM19Q9H013 955 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 SMG9Q9H0W8 520 aaKnown RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 DDX21Q9NR30 783 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 KLHL11Q9NVR0 708 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 H2AFY2Q9P0M6 372 aaPredicted RBP3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 TJP2Q9UDY2 1190 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 EMC9Q9Y3B6 208 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 PCDHA8Q9Y5H6 950 aa3.34□□□□□ -1.87
SCARNA11.3-201ENST00000517276 A0A087WZG4 1122 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SPDYE3A6NKU9 549 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PRRT4C9JH25 899 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 K7ESF4 209 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TRAF5O00463 557 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RGS13O14921 159 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ERC2O15083 957 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CLEC3AO75596 197 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZRANB2O95218 330 aaKnown RBP eCLIP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SNRPB2P08579 225 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SETSIPP0DME0 302 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC5A1P13866 664 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ATP2A2P16615 1042 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TYRP1P17643 537 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MAOBP27338 520 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GBP1P32455 592 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ECI1P42126 302 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RENBPP51606 427 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ALDH5A1P51649 535 aaPredicted RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GFRA1P56159 465 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 BIRC3Q13489 604 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LAMC2Q13753 1193 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTF2H3Q13889 308 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PDE3AQ14432 1141 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KCTD2Q14681 263 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 POU4F3Q15319 338 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LLGL1Q15334 1064 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC184Q52MB2 194 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 IFIT1BQ5T764 474 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms