RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 KIF18BQ86Y91 864 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 TRIM59Q8IWR1 403 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 TRIM22Q8IYM9 498 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CPA6Q8N4T0 437 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 PAF1Q8N7H5 531 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 BAHD1Q8TBE0 780 aaPredicted RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 BTN2A2Q8WVV5 523 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 KCTD13Q8WZ19 329 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CLIP3Q96DZ5 547 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 TMEM87BQ96K49 555 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 CCDC74BQ96LY2 380 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ORAI3Q9BRQ5 295 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SLC13A1Q9BZW2 595 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 GBP3Q9H0R5 595 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ATG3Q9NT62 314 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 PUF60Q9UHX1 559 aaKnown RBP3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ANAPC4Q9UJX5 808 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 NAGPAQ9UK23 515 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 RCAN3Q9UKA8 241 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ZBTB21Q9ULJ3 1066 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 SLC6A14Q9UN76 642 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 AKT3Q9Y243 479 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ANKRD6Q9Y2G4 727 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 HIF3AQ9Y2N7 669 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 EMC9Q9Y3B6 208 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 ZNF451Q9Y4E5 1061 aa3.24□□□□□ -1.89
SCARNA3-201ENST00000517097 FRMPD2Q68DX3 1309 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 RASSF10A6NK89 507 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SPDYE3A6NKU9 549 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ZNF891A8MT65 544 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 FZD9O00144 591 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 EIF4EBP3O60516 100 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SIN3BO75182 1162 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PPM1BO75688 479 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 TCEA3O75764 348 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 FKBP9O95302 570 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 CRTAMO95727 393 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 MT-CO1P00395 513 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 KCNA6P17658 529 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 LPOP22079 712 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ARL4DP49703 201 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 DSG1Q02413 1049 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 GTF2H3Q13889 308 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SART3Q15020 963 aaKnown RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PCBP2Q15366 365 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SAFBQ15424 915 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PPM1JQ5JR12 505 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ANO1Q5XXA6 986 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 TOGARAM2Q6ZUX3 1019 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 FKBP9P1Q75LS8 142 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ASXL2Q76L83 1435 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 EPM2AIP1Q7L775 607 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 MRPL41Q8IXM3 137 aaKnown RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 CACTIN-AS1Q8N1I8 211 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 CRACR2BQ8N4Y2 399 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SMC1BQ8NDV3 1235 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 C1orf162Q8NEQ5 155 aaPredicted RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 TNFRSF25Q93038 417 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ELAC2Q9BQ52 826 aaKnown RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 VTA1Q9NP79 307 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 ANLNQ9NQW6 1124 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 FRRS1LQ9P0K9 344 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 SAMD15Q9P1V8 674 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 WHRNQ9P202 907 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 DDX20Q9UHI6 824 aaKnown RBP3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PHF24Q9UPV7 400 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 FAM50BQ9Y247 325 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 GIT1Q9Y2X7 761 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 TRAF6Q9Y4K3 522 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PCDHGC5Q9Y5F6 944 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 PCDHA9Q9Y5H5 950 aa3.23□□□□□ -1.89
SCARNA3-201ENST00000517097 CBX4O00257 560 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ERC2O15083 957 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 GLRX3O76003 335 aaKnown RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 KCNH1O95259 989 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 LTFP02788 710 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ITGA4P13612 1032 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 CD247P20963 164 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 HOXC12P31275 282 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 RECQLP46063 649 aaPredicted RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 KCNJ6P48051 423 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 LSSP48449 732 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 TRAPPC10P48553 1259 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 GFRA1P56159 465 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 PCBP4P57723 403 aaKnown RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ZNF280AP59817 542 aaPredicted RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ERVK-24P63145 666 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 PIP4K2BP78356 416 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 MAP4K2Q12851 820 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 FAPQ12884 760 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 KLF1Q13351 362 aaPredicted RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 GALEQ14376 348 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ODF1Q14990 250 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 MAPRE1Q15691 268 aaKnown RBP3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ATP13A4Q4VNC1 1196 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ARHGAP29Q52LW3 1261 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 GPR158Q5T848 1215 aa3.22□□□□□ -1.89
SCARNA3-201ENST00000517097 ZNF468Q5VIY5 522 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms