RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 MMP19Q99542 508 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 DIS3Q9Y2L1 958 aaKnown RBP13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 ICAM1P05362 532 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 LIFRP42702 1097 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 TROAPQ12815 778 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 TRIM32Q13049 653 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 KRT32Q14532 448 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 OLFML2BQ68BL8 750 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 CCDC174Q6PII3 467 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 ADGRF4Q8IZF3 695 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 TRERF1Q96PN7 1200 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 LY9Q9HBG7 655 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 PLXNB2O15031 1838 aa13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
SCARNA20-201ENST00000516768 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
SCARNA20-201ENST00000516768 DNAJC25-GNG10A0A024R161 153 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 KLRF2D3W0D1 207 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 PGK2P07205 417 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 GJA8P48165 433 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 DHX32Q7L7V1 743 aaKnown RBP13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 MAP3K14Q99558 947 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 PAK6Q9NQU5 681 aaPredicted RBP13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 PNMA2Q9UL42 364 aa13.02□□□□□ -0.33
SCARNA20-201ENST00000516768 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 SGPL1O95470 568 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 ALAS1P13196 640 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 CAPN2P17655 700 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 ANKRD35Q8N283 1001 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 ACAD9Q9H845 621 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 JMJD4Q9H9V9 463 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 SNX14Q9Y5W7 946 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 COL11A1P12107 1806 aaPredicted RBP13.01□□□□□ -0.33
SCARNA20-201ENST00000516768 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
SCARNA20-201ENST00000516768 CYP2C19P33261 490 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 GRM4Q14833 912 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 SGMS1Q86VZ5 419 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 U2AF1L4Q8WU68 220 aaKnown RBP13□□□□□ -0.33
SCARNA20-201ENST00000516768 MTMR8Q96EF0 704 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 XRN2Q9H0D6 950 aaKnown RBP eCLIP13□□□□□ -0.33
SCARNA20-201ENST00000516768 RIOX1Q9H6W3 641 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 RNF146Q9NTX7 359 aa13□□□□□ -0.33
SCARNA20-201ENST00000516768 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 SMARCA1P28370 1054 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 MSL3Q8N5Y2 521 aaKnown RBP12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 CLEC4DQ8WXI8 215 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 DEFB118Q96PH6 123 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 TINF2Q9BSI4 451 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 A1CFQ9NQ94 594 aaKnown RBP12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 ZNFX1Q9P2E3 1918 aaKnown RBP12.99□□□□□ -0.33
SCARNA20-201ENST00000516768 DDAH1O94760 285 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CALM1P0DP23 149 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CALM2P0DP24 149 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CALM3P0DP25 149 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 PSMA5P28066 241 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CNTN2Q02246 1040 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 MLLT1Q03111 559 aaPredicted RBP12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 CDC37Q16543 378 aaPredicted RBP12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 SLC35G1Q2M3R5 365 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 PRAMEF19Q5SWL8 479 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 LHX8Q68G74 356 aa12.98□□□□□ -0.33
SCARNA20-201ENST00000516768 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms