RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 DDAH1O94760 285 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 XRCC5P13010 732 aaKnown RBP30.27■■■□□ 2.44
DDR1-279ENST00000515529 ELNP15502 786 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 ADORA2AP29274 412 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 GRM4Q14833 912 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 TKFCQ3LXA3 575 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 SYNE3Q6ZMZ3 975 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 CHST13Q8NET6 341 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 CTCFLQ8NI51 663 aaPredicted RBP30.27■■■□□ 2.44
DDR1-279ENST00000515529 AGBL1Q96MI9 1066 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 HOMER2Q9NSB8 354 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 SLC12A7Q9Y666 1083 aa30.27■■■□□ 2.44
DDR1-279ENST00000515529 KLRF2D3W0D1 207 aa30.26■■■□□ 2.43
DDR1-279ENST00000515529 EXOSC10Q01780 885 aaKnown RBP30.26■■■□□ 2.43
DDR1-279ENST00000515529 COL9A3Q14050 684 aaPredicted RBP30.26■■■□□ 2.43
DDR1-279ENST00000515529 USP6NLQ92738 828 aa30.26■■■□□ 2.43
DDR1-279ENST00000515529 TCEANC2Q96MN5 208 aa30.26■■■□□ 2.43
DDR1-279ENST00000515529 RIPK3Q9Y572 518 aa30.26■■■□□ 2.43
DDR1-279ENST00000515529 CAPN15O75808 1086 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 ICAM1P05362 532 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 CALM1P0DP23 149 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 CALM2P0DP24 149 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 CALM3P0DP25 149 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 ALAS1P13196 640 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 CASTP20810 708 aaKnown RBP30.25■■■□□ 2.43
DDR1-279ENST00000515529 KIF5BP33176 963 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 TROAPQ12815 778 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 CPVLQ9H3G5 476 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 MAD2L2Q9UI95 211 aa30.25■■■□□ 2.43
DDR1-279ENST00000515529 HMGCRP04035 888 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 ADGRF4Q8IZF3 695 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 STAG2Q8N3U4 1231 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 DDX11Q96FC9 970 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 ZNF333Q96JL9 665 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 ACAD9Q9H845 621 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 VAT1LQ9HCJ6 419 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 RNF146Q9NTX7 359 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 PLXNB2O15031 1838 aa30.24■■■□□ 2.43
DDR1-279ENST00000515529 ZNF536O15090 1300 aa30.23■■■□□ 2.43
DDR1-279ENST00000515529 PALM3A6NDB9 673 aaPredicted RBP30.23■■■□□ 2.43
DDR1-279ENST00000515529 MYCP01106 439 aaPredicted RBP30.23■■■□□ 2.43
DDR1-279ENST00000515529 ANKRD35Q8N283 1001 aa30.23■■■□□ 2.43
DDR1-279ENST00000515529 TRERF1Q96PN7 1200 aa30.23■■■□□ 2.43
DDR1-279ENST00000515529 MAP3K14Q99558 947 aa30.23■■■□□ 2.43
DDR1-279ENST00000515529 MYL10Q9BUA6 226 aa30.23■■■□□ 2.43
DDR1-279ENST00000515529 INHAP05111 366 aa30.22■■■□□ 2.43
DDR1-279ENST00000515529 CDC37Q16543 378 aaPredicted RBP30.22■■■□□ 2.43
DDR1-279ENST00000515529 SGMS1Q86VZ5 419 aa30.22■■■□□ 2.43
DDR1-279ENST00000515529 HOXC6P09630 235 aa30.21■■■□□ 2.43
DDR1-279ENST00000515529 CPA1P15085 419 aa30.21■■■□□ 2.43
DDR1-279ENST00000515529 RPS6KB1P23443 525 aa30.21■■■□□ 2.43
DDR1-279ENST00000515529 TMEM106CQ9BVX2 250 aa30.21■■■□□ 2.43
DDR1-279ENST00000515529 GNAQP50148 359 aa30.2■■■□□ 2.43
DDR1-279ENST00000515529 TRIB2Q92519 343 aa30.2■■■□□ 2.43
DDR1-279ENST00000515529 NAP1L2Q9ULW6 460 aaPredicted RBP30.2■■■□□ 2.43
DDR1-279ENST00000515529 CYP46A1Q9Y6A2 500 aa30.2■■■□□ 2.43
DDR1-279ENST00000515529 ZNF236Q9UL36 1845 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 PGK2P07205 417 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 MFSD14CQ5VZR4 134 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 Q6ZUG5 572 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 MICU3Q86XE3 530 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 LZTS2Q9BRK4 669 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 JMJD4Q9H9V9 463 aa30.19■■■□□ 2.42
DDR1-279ENST00000515529 COBLO75128 1261 aa30.18■■■□□ 2.42
DDR1-279ENST00000515529 CCL14Q16627 93 aa30.18■■■□□ 2.42
DDR1-279ENST00000515529 NPLOC4Q8TAT6 608 aa30.18■■■□□ 2.42
DDR1-279ENST00000515529 TM6SF1Q9BZW5 370 aa30.18■■■□□ 2.42
DDR1-279ENST00000515529 RXRAP19793 462 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 QRICH1Q2TAL8 776 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 USH1GQ495M9 461 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 C8orf34Q49A92 452 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 APOA5Q6Q788 366 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 RUFY3Q7L099 469 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.17■■■□□ 2.42
DDR1-279ENST00000515529 RAB11FIP4Q86YS3 637 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 CCDC144CPQ8IYA2 1237 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 PFASO15067 1338 aa30.17■■■□□ 2.42
DDR1-279ENST00000515529 KLF18A0A0U1RQI7 1052 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 ZBTB43O43298 467 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 ANAPC15P60006 121 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 FBXO11Q86XK2 927 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 BRF1Q92994 677 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 RNF208Q9H0X6 261 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 ZSWIM6Q9HCJ5 1215 aa30.16■■■□□ 2.42
DDR1-279ENST00000515529 CCL5P13501 91 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 TAL1P17542 331 aaPredicted RBP30.15■■■□□ 2.42
DDR1-279ENST00000515529 SOX10P56693 466 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 MTFR1Q15390 333 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 MUM1L1Q5H9M0 696 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 OLFML2BQ68BL8 750 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 NSMFQ6X4W1 530 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 HOMER1Q86YM7 354 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 FANCBQ8NB91 859 aa30.15■■■□□ 2.42
DDR1-279ENST00000515529 DIS3Q9Y2L1 958 aaKnown RBP30.15■■■□□ 2.42
DDR1-279ENST00000515529 ZBTB5O15062 677 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 SEC24BO95487 1268 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 PRKAR2AP13861 404 aaKnown RBP30.14■■■□□ 2.42
DDR1-279ENST00000515529 TRAF1Q13077 416 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 MAML3Q96JK9 1138 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 AMNQ9BXJ7 453 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms