RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 WDR46O15213 610 aaKnown RBP12.83□□□□□ -0.36
NEDD9-215ENST00000514660 CYP2C9P11712 490 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
NEDD9-215ENST00000514660 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
NEDD9-215ENST00000514660 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
NEDD9-215ENST00000514660 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 TECTAO75443 2155 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 TMEM179Q6ZVK1 233 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 HFE2Q6ZVN8 426 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 ARMCX2Q7L311 632 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 ZNF512BQ96KM6 892 aaPredicted RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 UBE2ZQ9H832 354 aaPredicted RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
NEDD9-215ENST00000514660 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
NEDD9-215ENST00000514660 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
NEDD9-215ENST00000514660 ICA1Q05084 483 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 HERC6Q8IVU3 1022 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 PRSS33Q8NF86 280 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
NEDD9-215ENST00000514660 TRMT13Q9NUP7 481 aaKnown RBP12.81□□□□□ -0.36
NEDD9-215ENST00000514660 TRIP12Q14669 1992 aaPredicted RBP12.8□□□□□ -0.36
NEDD9-215ENST00000514660 CYP2D7A0A087X1C5 515 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
NEDD9-215ENST00000514660 KCNA5P22460 613 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 GPNMBQ14956 572 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
NEDD9-215ENST00000514660 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
NEDD9-215ENST00000514660 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
NEDD9-215ENST00000514660 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 SUGCTQ9HAC7 445 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 CFAP54Q96N23 3096 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 TANC1Q9C0D5 1861 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 LCTP09848 1927 aa12.8□□□□□ -0.36
NEDD9-215ENST00000514660 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 SMPD1P17405 629 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 SSTR3P32745 418 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 TCTN1Q2MV58 587 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 IER5LQ5T953 404 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 ALG13Q9NP73 1137 aaKnown RBP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 GPR108Q9NPR9 543 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-215ENST00000514660 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
NEDD9-215ENST00000514660 SIP14410 1827 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 ZDBF2Q9HCK1 2354 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 DCXO43602 365 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 PRKAB2O43741 272 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
NEDD9-215ENST00000514660 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-215ENST00000514660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEDD9-215ENST00000514660 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-215ENST00000514660 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 ARHGEF10LQ9HCE6 1279 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 TRIOO75962 3097 aa12.78□□□□□ -0.36
NEDD9-215ENST00000514660 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 ALADP13716 330 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 TNFAIP2Q03169 654 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 TLK2Q86UE8 772 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 CPXCR1Q8N123 301 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 PHOSPHO2Q8TCD6 241 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.37
NEDD9-215ENST00000514660 TEX13BQ9BXU2 312 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
NEDD9-215ENST00000514660 MYO7AQ13402 2215 aa12.77□□□□□ -0.37
NEDD9-215ENST00000514660 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
NEDD9-215ENST00000514660 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
NEDD9-215ENST00000514660 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
NEDD9-215ENST00000514660 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-215ENST00000514660 DYNC1LI2O43237 492 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-215ENST00000514660 IGSF3O75054 1194 aa12.76□□□□□ -0.37
NEDD9-215ENST00000514660 DEFB103AP81534 67 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms