RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 VAT1LQ9HCJ6 419 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
USP46-209ENST00000514536 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 PARP14Q460N5 1801 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 A0A0G2JMZ2 1700 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 PALM3A6NDB9 673 aaPredicted RBP16.28■□□□□ 0.2
USP46-209ENST00000514536 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
USP46-209ENST00000514536 GRM4Q14833 912 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
USP46-209ENST00000514536 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.2
USP46-209ENST00000514536 COBLO75128 1261 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 SEC24BO95487 1268 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 ALAS1P13196 640 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 KCTD2Q14681 263 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 ADGRF4Q8IZF3 695 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 ABRAQ8N0Z2 381 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 ZNF333Q96JL9 665 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
USP46-209ENST00000514536 ICAM1P05362 532 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
USP46-209ENST00000514536 PSMA5P28066 241 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 CCL14Q16627 93 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 TRIB2Q92519 343 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 APBA2Q99767 749 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
USP46-209ENST00000514536 DDAH1O94760 285 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 INHAP05111 366 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 PGK2P07205 417 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 HOXC6P09630 235 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
USP46-209ENST00000514536 UBXN2AP68543 259 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 FGD1P98174 961 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 MTFR1Q15390 333 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 TKFCQ3LXA3 575 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 JMJD4Q9H9V9 463 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
USP46-209ENST00000514536 COL11A1P12107 1806 aaPredicted RBP16.25■□□□□ 0.19
USP46-209ENST00000514536 HMGCRP04035 888 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 RXRAP19793 462 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 TRIM32Q13049 653 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
USP46-209ENST00000514536 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 Q6ZUG5 572 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 SGMS1Q86VZ5 419 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 TRMT44Q8IYL2 757 aaKnown RBP16.25■□□□□ 0.19
USP46-209ENST00000514536 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
USP46-209ENST00000514536 ACAD9Q9H845 621 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 SLC5A4Q9NY91 659 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 FLRT1Q9NZU1 646 aa16.25■□□□□ 0.19
USP46-209ENST00000514536 CALM1P0DP23 149 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 CALM2P0DP24 149 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 CALM3P0DP25 149 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 MAP3K14Q99558 947 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
USP46-209ENST00000514536 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 KIF5BP33176 963 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 FANCBQ8NB91 859 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 HTTP42858 3142 aa16.23■□□□□ 0.19
USP46-209ENST00000514536 CYTH3O43739 400 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 CCL5P13501 91 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 ZNF792Q3KQV3 632 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 USH1GQ495M9 461 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 MFSD14CQ5VZR4 134 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 APOA5Q6Q788 366 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
USP46-209ENST00000514536 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 BRF1Q92994 677 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 MAML3Q96JK9 1138 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 TM6SF1Q9BZW5 370 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 UNC93B1Q9H1C4 597 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 RIOX1Q9H6W3 641 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 A1CFQ9NQ94 594 aaKnown RBP16.22■□□□□ 0.19
USP46-209ENST00000514536 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
USP46-209ENST00000514536 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
USP46-209ENST00000514536 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms