RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PARP1P09874 1014 aaKnown RBP9.69□□□□□ -0.86
CCL28-204ENST00000514421 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 FCER1AP12319 257 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 RGS2P41220 211 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 LIFRP42702 1097 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 CUL4AQ13619 759 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 ASPRV1Q53RT3 343 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 FRMPD2Q68DX3 1309 aaPredicted RBP9.69□□□□□ -0.86
CCL28-204ENST00000514421 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
CCL28-204ENST00000514421 DPP9Q86TI2 863 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 ABRAQ8N0Z2 381 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 CHST13Q8NET6 341 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 SLC5A4Q9NY91 659 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 RIPK3Q9Y572 518 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
CCL28-204ENST00000514421 MYH8P13535 1937 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 GREB1LQ9C091 1923 aaPredicted RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 WDR19Q8NEZ3 1342 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 SH2B2O14492 632 aaPredicted RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 HOXC6P09630 235 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 PSMA5P28066 241 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 UBXN2AP68543 259 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 TROAPQ12815 778 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 GRB14Q14449 540 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 KCTD2Q14681 263 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 ADCK5Q3MIX3 580 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 CCDC174Q6PII3 467 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 RASGRP2Q7LDG7 609 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 SH3TC2Q8TF17 1288 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 INTS4Q96HW7 963 aaKnown RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 MMP19Q99542 508 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 MAP3K14Q99558 947 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 TMEM106CQ9BVX2 250 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 RANBP17Q9H2T7 1088 aaKnown RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 LY9Q9HBG7 655 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 FBXO40Q9UH90 709 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 KIAA0100Q14667 2235 aaKnown RBP9.68□□□□□ -0.86
CCL28-204ENST00000514421 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
CCL28-204ENST00000514421 ZNF536O15090 1300 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 CCDC69A6NI79 296 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 KLRF2D3W0D1 207 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 COBLO75128 1261 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 CALM1P0DP23 149 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 CALM2P0DP24 149 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 CALM3P0DP25 149 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 ELNP15502 786 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 ADORA2AP29274 412 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 NEK4P51957 841 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 SNAP25P60880 206 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 GRM4Q14833 912 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCL28-204ENST00000514421 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 ADGRF4Q8IZF3 695 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
CCL28-204ENST00000514421 TRERF1Q96PN7 1200 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 LRRC2Q9BYS8 371 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 VAT1LQ9HCJ6 419 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
CCL28-204ENST00000514421 MAD2L2Q9UI95 211 aa9.67□□□□□ -0.86
CCL28-204ENST00000514421 DIS3Q9Y2L1 958 aaKnown RBP9.67□□□□□ -0.86
CCL28-204ENST00000514421 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
CCL28-204ENST00000514421 DDAH1O94760 285 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 ICAM1P05362 532 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 ALAS1P13196 640 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 KIF5BP33176 963 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 GNAQP50148 359 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 COL9A3Q14050 684 aaPredicted RBP9.66□□□□□ -0.86
CCL28-204ENST00000514421 MFSD14CQ5VZR4 134 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 BLOC1S2Q6QNY1 142 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 ZNF654Q8IZM8 581 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 ANKRD35Q8N283 1001 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 APBA2Q99767 749 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 LZTS2Q9BRK4 669 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 CPVLQ9H3G5 476 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 ACAD9Q9H845 621 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 JMJD4Q9H9V9 463 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 CCPG1Q9ULG6 757 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 SLC12A7Q9Y666 1083 aa9.66□□□□□ -0.86
CCL28-204ENST00000514421 LAMA4Q16363 1823 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms