RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 HOMER2Q9NSB8 354 aa16.09■□□□□ 0.17
CCND3-220ENST00000514382 TMEM39AQ9NV64 488 aa16.09■□□□□ 0.17
CCND3-220ENST00000514382 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
CCND3-220ENST00000514382 UMODL1Q5DID0 1318 aa16.09■□□□□ 0.17
CCND3-220ENST00000514382 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
CCND3-220ENST00000514382 RAG1P15918 1043 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCND3-220ENST00000514382 ARMCX2Q7L311 632 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 AMOTL1Q8IY63 956 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 PRPF38AQ8NAV1 312 aaKnown RBP16.08■□□□□ 0.16
CCND3-220ENST00000514382 VWCEQ96DN2 955 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
CCND3-220ENST00000514382 STARD7Q9NQZ5 370 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 GRIN2DO15399 1336 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 PLIN4Q96Q06 1357 aa16.08■□□□□ 0.16
CCND3-220ENST00000514382 DUSP11O75319 330 aaKnown RBP16.07■□□□□ 0.16
CCND3-220ENST00000514382 ASGR1P07306 291 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 ACRP10323 421 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 TDO2P48775 406 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 FPGSQ05932 587 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 MUM1L1Q5H9M0 696 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 TMEM240Q5SV17 173 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 GIMAP6Q6P9H5 292 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 CCDC144CPQ8IYA2 1237 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
CCND3-220ENST00000514382 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 IL17RBQ9NRM6 502 aa16.07■□□□□ 0.16
CCND3-220ENST00000514382 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
CCND3-220ENST00000514382 TIMP1P01033 207 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
CCND3-220ENST00000514382 CSF2RAP15509 400 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 DNAJB2P25686 324 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 CST5P28325 142 aaPredicted RBP16.06■□□□□ 0.16
CCND3-220ENST00000514382 GJA9P57773 515 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
CCND3-220ENST00000514382 FAM126BQ8IXS8 530 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 NEDD1Q8NHV4 660 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
CCND3-220ENST00000514382 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCND3-220ENST00000514382 MUC3AQ02505 3323 aa16.06■□□□□ 0.16
CCND3-220ENST00000514382 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 TMEM232C9JQI7 657 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 ZBED4O75132 1171 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 FOSL2P15408 326 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 CYP2C18P33260 490 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 COPB2P35606 906 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 TFAP4Q01664 338 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
CCND3-220ENST00000514382 PPP1R13LQ8WUF5 828 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 PPP1R12CQ9BZL4 782 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 CXXC1Q9P0U4 656 aaPredicted RBP16.05■□□□□ 0.16
CCND3-220ENST00000514382 FEM1BQ9UK73 627 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 PTPRSQ13332 1948 aa16.05■□□□□ 0.16
CCND3-220ENST00000514382 MOXD2PA6NHM9 499 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 TTLL1O95922 423 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 CD4P01730 458 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 APPP05067 770 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 NEFLP07196 543 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 BMP3P12645 472 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 MCCP23508 829 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 PPARAQ07869 468 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 ZMYM1Q5SVZ6 1142 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
CCND3-220ENST00000514382 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 GNEQ9Y223 722 aaKnown RBP16.04■□□□□ 0.16
CCND3-220ENST00000514382 TET1Q8NFU7 2136 aa16.04■□□□□ 0.16
CCND3-220ENST00000514382 ARVCFO00192 962 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 SMPD1P17405 629 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 ADGRE1Q14246 886 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 TTBK2Q6IQ55 1244 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 MFSD5Q6N075 450 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 ZNF365Q70YC5 407 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
CCND3-220ENST00000514382 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
CCND3-220ENST00000514382 ELP1O95163 1332 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 PSMC6P62333 389 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 NKX3-2P78367 333 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 GNASQ5JWF2 1037 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
CCND3-220ENST00000514382 FBXO16Q8IX29 292 aaPredicted RBP16.02■□□□□ 0.16
CCND3-220ENST00000514382 SLC43A3Q8NBI5 491 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms