RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
RNF4-221ENST00000513643 DPP9Q86TI2 863 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 CPXCR1Q8N123 301 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 MSL3Q8N5Y2 521 aaKnown RBP11.4□□□□□ -0.58
RNF4-221ENST00000513643 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 MMP19Q99542 508 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 FBXO40Q9UH90 709 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
RNF4-221ENST00000513643 PGK2P07205 417 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 CYP2C19P33261 490 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 TROAPQ12815 778 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 KCTD2Q14681 263 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 MFSD14CQ5VZR4 134 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 CREB3L3Q68CJ9 461 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
RNF4-221ENST00000513643 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 FAM133AQ8N9E0 248 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 NCOA7Q8NI08 942 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
RNF4-221ENST00000513643 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 SNAI1O95863 264 aaPredicted RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 SNAP25P60880 206 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 TRDNQ13061 729 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 MAF1Q9H063 256 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 MAD2L2Q9UI95 211 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 ZNFX1Q9P2E3 1918 aaKnown RBP11.38□□□□□ -0.59
RNF4-221ENST00000513643 SMCHD1A6NHR9 2005 aa11.38□□□□□ -0.59
RNF4-221ENST00000513643 ASTN1O14525 1302 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 SYNGAP1Q96PV0 1343 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 ZNF865P0CJ78 1059 aaPredicted RBP11.37□□□□□ -0.59
RNF4-221ENST00000513643 GOLGA8HP0CJ92 632 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 COL6A1P12109 1028 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 EXOSC10Q01780 885 aaKnown RBP11.37□□□□□ -0.59
RNF4-221ENST00000513643 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 IFIT1BQ5T764 474 aaKnown RBP11.37□□□□□ -0.59
RNF4-221ENST00000513643 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 MAP3K14Q99558 947 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 ACAD9Q9H845 621 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 LY9Q9HBG7 655 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 CYP39A1Q9NYL5 469 aa11.37□□□□□ -0.59
RNF4-221ENST00000513643 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 IFIT3O14879 490 aaKnown RBP11.36□□□□□ -0.59
RNF4-221ENST00000513643 SEPT4O43236 478 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 EPB41L2O43491 1005 aaKnown RBP11.36□□□□□ -0.59
RNF4-221ENST00000513643 MSCO60682 206 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
RNF4-221ENST00000513643 CNTN2Q02246 1040 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 GHRHRQ02643 423 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 GRM4Q14833 912 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 PRAMEF19Q5SWL8 479 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 CCDC174Q6PII3 467 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 CHST3Q7LGC8 479 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 STAG2Q8N3U4 1231 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 MORC4Q8TE76 937 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 DDX11Q96FC9 970 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 CPVLQ9H3G5 476 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 JMJD4Q9H9V9 463 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
RNF4-221ENST00000513643 DDX20Q9UHI6 824 aaKnown RBP11.36□□□□□ -0.59
RNF4-221ENST00000513643 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
RNF4-221ENST00000513643 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 PARP1P09874 1014 aaKnown RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 ALAS1P13196 640 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 HSPA4P34932 840 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 LIFRP42702 1097 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 NKX3-2P78367 333 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 RALYLQ86SE5 291 aaKnown RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 DIS3LQ8TF46 1054 aaKnown RBP11.35□□□□□ -0.59
RNF4-221ENST00000513643 TMEM87BQ96K49 555 aa11.35□□□□□ -0.59
RNF4-221ENST00000513643 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms