RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 TNFAIP2Q03169 654 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 IFIT5Q13325 482 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 HSP90AA2PQ14568 343 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 ZNF460Q14592 562 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 TERF2Q15554 542 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 NBPF8Q3BBV2 869 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 CFAP100Q494V2 611 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 SV2CQ496J9 727 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 CCDC158Q5M9N0 1113 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 YOD1Q5VVQ6 348 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 KIAA1211LQ6NV74 962 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 GPR153Q6NV75 609 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 TMCO3Q6UWJ1 677 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 UBE2R2Q712K3 238 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 VASH1Q7L8A9 365 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 BRAPQ7Z569 592 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 GALNT5Q7Z7M9 940 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 C11orf74Q86VG3 221 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 CMTR2Q8IYT2 770 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 C7orf61Q8IZ16 206 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 TAB3Q8N5C8 712 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 ARL6IP6Q8N6S5 226 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 ZNF713Q8N859 430 aaPredicted RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 DEPTORQ8TB45 409 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 AFAP1L1Q8TED9 768 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 BTN2A2Q8WVV5 523 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 HVCN1Q96D96 273 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 XAGE2Q96GT9 111 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 XPO4Q9C0E2 1151 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 WDR12Q9GZL7 423 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 PHAXQ9H814 394 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 FAM204AQ9H8W3 233 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 RSAD1Q9HA92 442 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 LIN7BQ9HAP6 207 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 AGO4Q9HCK5 861 aaKnown RBP3.89□□□□□ -1.79
PVT1-202ENST00000512617 TRIM39Q9HCM9 518 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 LATS2Q9NRM7 1088 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 TMPRSS4Q9NRS4 437 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 ANKEF1Q9NU02 776 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 DNM3Q9UQ16 869 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 MRFAP1Q9Y605 127 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 SYNJ2O15056 1496 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 ARAP1Q96P48 1450 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 IGF1RP08069 1367 aa3.89□□□□□ -1.79
PVT1-202ENST00000512617 WRNQ14191 1432 aaPredicted RBP eCLIP3.88□□□□□ -1.79
PVT1-202ENST00000512617 PBRM1Q86U86 1689 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 GAPVD1Q14C86 1478 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 A0A1W2PQU0 124 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 M0R2C6 588 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 FZD9O00144 591 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 ENC1O14682 589 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 AP1G1O43747 822 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 ZBED1O96006 694 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 CFBP00751 764 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 IL2RAP01589 272 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 IDEP14735 1019 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 HOXD12P35452 270 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 KRT9P35527 623 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 MMP14P50281 582 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 IL2P60568 153 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 DHX9Q08211 1270 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 FAPQ12884 760 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 KLF1Q13351 362 aaPredicted RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 SMC1AQ14683 1233 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 PSMD6Q15008 389 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 LRRFIP1Q32MZ4 808 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 NBPF9Q3BBW0 867 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 RILPL1Q5EBL4 403 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 TRIM61Q5EBN2 209 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 DNAJC21Q5F1R6 531 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 HIBCHQ6NVY1 386 aaPredicted RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 PGM2L1Q6PCE3 622 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 CCDC149Q6ZUS6 474 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 LAPTM4BQ86VI4 370 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 BRSK2Q8IWQ3 736 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 LSMEM1Q8N8F7 131 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 CEP120Q8N960 986 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 KCT2Q8NC54 265 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 LSM14AQ8ND56 463 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 SLC7A14Q8TBB6 771 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 SLC35G2Q8TBE7 412 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 RHPN1Q8TCX5 695 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 FERMT2Q96AC1 680 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 DDX11Q96FC9 970 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 VMP1Q96GC9 406 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 AHCYL2Q96HN2 611 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 LRCH3Q96II8 777 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 ZMAT2Q96NC0 199 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 NECAB3Q96P71 396 aaPredicted RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 BARD1Q99728 777 aaKnown RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 RNF38Q9H0F5 515 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 ANTXR1Q9H6X2 564 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 PLEKHA5Q9HAU0 1116 aa3.88□□□□□ -1.79
PVT1-202ENST00000512617 TOPORSQ9NS56 1045 aaPredicted RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 ABI2Q9NYB9 513 aaPredicted RBP3.88□□□□□ -1.79
PVT1-202ENST00000512617 NKIRAS2Q9NYR9 191 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms