RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 ZNF589Q86UQ0 364 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 SPATC1LQ9H0A9 340 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 MTCH2Q9Y6C9 303 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 FLT1P17948 1338 aa12.37□□□□□ -0.43
PDLIM5-217ENST00000512274 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 PTH1RQ03431 593 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 KRT32Q14532 448 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 KCNA10Q16322 511 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 MTIF3Q9H2K0 278 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 IL23AQ9NPF7 189 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 LRP2BPQ9P2M1 347 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 COG5Q9UP83 839 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 MYH1P12882 1939 aa12.36□□□□□ -0.43
PDLIM5-217ENST00000512274 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 ADAMTS4O75173 837 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 CHGBP05060 677 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 PGK2P07205 417 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 ALX1Q15699 326 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 SHCBP1Q8NEM2 672 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 HLA-CQ95604 372 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 TSEN34Q9BSV6 310 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 KIAA1683Q9H0B3 1180 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 SYNRGQ9UMZ2 1314 aa12.35□□□□□ -0.43
PDLIM5-217ENST00000512274 REV3LO60673 3130 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 AKR1A1P14550 325 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 PDE6AP16499 860 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 PSMA5P28066 241 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 DDIT3P35638 169 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 COG2Q14746 738 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 CTNNA3Q9UI47 895 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
PDLIM5-217ENST00000512274 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 EPOPA6NHQ4 379 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 SLC27A2O14975 620 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 BAG3O95817 575 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 HSPD1P10809 573 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 FCER1AP12319 257 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 GNAT2P19087 354 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 CDK7P50613 346 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 CCL23P55773 120 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 TTC14Q96N46 770 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 TINF2Q9BSI4 451 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 MROH8Q9H579 483 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 HOXC10Q9NYD6 342 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 PCDHA11Q9Y5I1 949 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 SLC4A7Q9Y6M7 1214 aa12.33□□□□□ -0.44
PDLIM5-217ENST00000512274 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 ARVCFO00192 962 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 TLR3O15455 904 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 ASGR1P07306 291 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 PLCG2P16885 1265 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 CUL4AQ13619 759 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 ADGRA1Q86SQ6 560 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 CERS3Q8IU89 383 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 KLHDC9Q8NEP7 349 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 MMP19Q99542 508 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 NRBP1Q9UHY1 535 aa12.32□□□□□ -0.44
PDLIM5-217ENST00000512274 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 FOXP2O15409 715 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 GPAA1O43292 621 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 CA3P07451 260 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms