RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TMEM47Q9BQJ4 181 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.922e-7■■■■■ 46.7
HTT-209ENST00000512068 IL17RBQ9NRM6 502 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 ATRNL1Q5VV63 1379 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 RAD21O60216 631 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 FDPSP14324 419 aaKnown RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 SHMT1P34896 483 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 GMPSP49915 693 aaPredicted RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 TROAPQ12815 778 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 RESTQ13127 1097 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 NTRK3Q16288 839 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 KIF4BQ2VIQ3 1234 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 KRT40Q6A162 431 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 FAM83AQ86UY5 434 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 SPATA32Q96LK8 384 aa9.32□□□□□ -0.92
HTT-209ENST00000512068 SEC63Q9UGP8 760 aaKnown RBP9.32□□□□□ -0.92
HTT-209ENST00000512068 WNT10BO00744 389 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 PLEKHA8P1O95397 391 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ADH1BP00325 375 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 UBE2HP62256 183 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ICA1Q05084 483 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 CCDC96Q2M329 555 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 KLHL40Q2TBA0 621 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ASPRV1Q53RT3 343 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 RCSD1Q6JBY9 416 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ZFPM1Q8IX07 1006 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 GPC2Q8N158 579 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CMTR1Q8N1G2 835 aaKnown RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 FAM160A2Q8N612 972 aaPredicted RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 TMEM87AQ8NBN3 555 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CCDC148Q8NFR7 591 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CCDC12Q8WUD4 166 aaPredicted RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 SYT17Q9BSW7 474 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 KANSL2Q9H9L4 492 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 ARHGEF10LQ9HCE6 1279 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CLIP2Q9UDT6 1046 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CNOT7Q9UIV1 285 aaKnown RBP9.31□□□□□ -0.92
HTT-209ENST00000512068 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
HTT-209ENST00000512068 SBF1O95248 1867 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 FAM196BA6NMK8 535 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 GDF11O95390 407 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 SCG2P13521 617 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 CALML3P27482 149 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 KRT2P35908 639 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 STK38Q15208 465 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 TBC1D10BQ4KMP7 808 aaPredicted RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 OTUD7BQ6GQQ9 843 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 NBPF11Q86T75 865 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 LRRC47Q8N1G4 583 aaKnown RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 RRP36Q96EU6 259 aaKnown RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 SH2D4AQ9H788 454 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 GREB1LQ9C091 1923 aaPredicted RBP9.3□□□□□ -0.92
HTT-209ENST00000512068 ZNF541Q9H0D2 1346 aa9.3□□□□□ -0.92
HTT-209ENST00000512068 BAZ2BQ9UIF8 2168 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 KLRF2D3W0D1 207 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 TLL1O43897 1013 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 MMP1P03956 469 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 NLRP5P59047 1200 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 CEBPZQ03701 1054 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 GPR162Q16538 588 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 NBPF9Q3BBW0 867 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 GPATCH4Q5T3I0 446 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 TATDN1Q6P1N9 297 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 DIS3L2Q8IYB7 885 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 SRBD1Q8N5C6 995 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 BICD2Q8TD16 824 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 PIBF1Q8WXW3 757 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 TSC1Q92574 1164 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 AIFM3Q96NN9 605 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 NYAP2Q9P242 653 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 NOL7Q9UMY1 257 aaKnown RBP9.29□□□□□ -0.92
HTT-209ENST00000512068 ELP1O95163 1332 aa9.29□□□□□ -0.92
HTT-209ENST00000512068 FRMPD2Q68DX3 1309 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms