RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
COPS4-211ENST00000511891 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
COPS4-211ENST00000511891 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 MSCO60682 206 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 FGRP09769 529 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 COPB2P35606 906 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 SLC1A4P43007 532 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.53
COPS4-211ENST00000511891 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
COPS4-211ENST00000511891 KCTD1Q719H9 257 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.53
COPS4-211ENST00000511891 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
COPS4-211ENST00000511891 SEPT4O43236 478 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 STAT2P52630 851 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 CCDC96Q2M329 555 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 LENG1Q96BZ8 264 aaPredicted RBP11.7□□□□□ -0.54
COPS4-211ENST00000511891 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 TINF2Q9BSI4 451 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
COPS4-211ENST00000511891 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 ZNF536O15090 1300 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 NEDD4P46934 1319 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 DNM1LO00429 736 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 NOVP48745 357 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 CCDC174Q6PII3 467 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
COPS4-211ENST00000511891 IL25Q9H293 177 aa11.69□□□□□ -0.54
COPS4-211ENST00000511891 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
COPS4-211ENST00000511891 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 FRMPD2Q68DX3 1309 aaPredicted RBP11.68□□□□□ -0.54
COPS4-211ENST00000511891 SNAI1O95863 264 aaPredicted RBP11.68□□□□□ -0.54
COPS4-211ENST00000511891 ZNF865P0CJ78 1059 aaPredicted RBP11.68□□□□□ -0.54
COPS4-211ENST00000511891 GSPT1P15170 499 aaKnown RBP11.68□□□□□ -0.54
COPS4-211ENST00000511891 SLC16A2P36021 539 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 OAZ1P54368 228 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 MFAP1P55081 439 aaKnown RBP11.68□□□□□ -0.54
COPS4-211ENST00000511891 MFSD6Q6ZSS7 791 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 FGD4Q96M96 766 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
COPS4-211ENST00000511891 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 PLA2G6O60733 806 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 PGK1P00558 417 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
COPS4-211ENST00000511891 ALAS1P13196 640 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 MAGEA10P43363 369 aaPredicted RBP11.67□□□□□ -0.54
COPS4-211ENST00000511891 RTP1P59025 263 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 LRRC41Q15345 812 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 TTC22Q5TAA0 569 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
COPS4-211ENST00000511891 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 FERMT2Q96AC1 680 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 GDF15Q99988 308 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 ACAD9Q9H845 621 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 NRBP1Q9UHY1 535 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 ZHX1Q9UKY1 873 aaPredicted RBP11.67□□□□□ -0.54
COPS4-211ENST00000511891 CNPY2Q9Y2B0 182 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 SMCHD1A6NHR9 2005 aa11.67□□□□□ -0.54
COPS4-211ENST00000511891 HIP1O00291 1037 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 ZNF213O14771 459 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 FDX1P10109 184 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 RARBP10826 455 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
COPS4-211ENST00000511891 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 TRERF1Q96PN7 1200 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 RNF41Q9H4P4 317 aaPredicted RBP11.66□□□□□ -0.54
COPS4-211ENST00000511891 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
COPS4-211ENST00000511891 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 ATP11BQ9Y2G3 1177 aa11.66□□□□□ -0.54
COPS4-211ENST00000511891 DDX49Q9Y6V7 483 aaKnown RBP11.66□□□□□ -0.54
COPS4-211ENST00000511891 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
COPS4-211ENST00000511891 B4E1Z4 1266 aa11.65□□□□□ -0.54
COPS4-211ENST00000511891 SOX1O00570 391 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms