RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SGPL1O95470 568 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 ICAM1P05362 532 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 PGK2P07205 417 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 TROAPQ12815 778 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 KCTD2Q14681 263 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 MAML3Q96JK9 1138 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 HMX1Q9NP08 348 aaPredicted RBP13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
HMGXB3-203ENST00000510472 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 CAPN2P17655 700 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 CYP2C19P33261 490 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 MFSD14CQ5VZR4 134 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 LHX8Q68G74 356 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 FGD4Q96M96 766 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 LY9Q9HBG7 655 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 CTDP1Q9Y5B0 961 aaPredicted RBP13.75□□□□□ -0.21
HMGXB3-203ENST00000510472 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 PRC1O43663 620 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 MCM5P33992 734 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 HSPA4P34932 840 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
HMGXB3-203ENST00000510472 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 PARP1P09874 1014 aaKnown RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 CYBAP13498 195 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 LIFRP42702 1097 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 GRM4Q14833 912 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 WTAPQ15007 396 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 TMTC2Q8N394 836 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 DDX11Q96FC9 970 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 TMEM87BQ96K49 555 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 ACAD9Q9H845 621 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 RNF146Q9NTX7 359 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 OGDHLQ9ULD0 1010 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
HMGXB3-203ENST00000510472 ZNF236Q9UL36 1845 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 ERICH2A1L162 156 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 REC8O95072 547 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 ALAS1P13196 640 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 ANKRD35Q8N283 1001 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 TINF2Q9BSI4 451 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
HMGXB3-203ENST00000510472 CYTH3O43739 400 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 SNAI1O95863 264 aaPredicted RBP13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 KRT32Q14532 448 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
HMGXB3-203ENST00000510472 ASTN1O14525 1302 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 SYNGAP1Q96PV0 1343 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms