RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 STAG2Q8N3U4 1231 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
HTT-207ENST00000509751 CCPG1Q9ULG6 757 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 SNX14Q9Y5W7 946 aa17.67■□□□□ 0.42
HTT-207ENST00000509751 STRNO43815 780 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 COBLO75128 1261 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 HMGCRP04035 888 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 OAZ1P54368 228 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
HTT-207ENST00000509751 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 RNF146Q9NTX7 359 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 FLRT1Q9NZU1 646 aa17.66■□□□□ 0.42
HTT-207ENST00000509751 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
HTT-207ENST00000509751 CCL5P13501 91 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 GRM4Q14833 912 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 TSGA10IPQ3SY00 556 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 KCNB2Q92953 911 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
HTT-207ENST00000509751 KLRF2D3W0D1 207 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 ICAM1P05362 532 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 RXRAP19793 462 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 CDC37Q16543 378 aaPredicted RBP17.64■□□□□ 0.41
HTT-207ENST00000509751 MUM1L1Q5H9M0 696 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
HTT-207ENST00000509751 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 ABRAQ8N0Z2 381 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 ANKRD35Q8N283 1001 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 CHST13Q8NET6 341 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 DDX11Q96FC9 970 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 TRERF1Q96PN7 1200 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 RNF208Q9H0X6 261 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 ACAD9Q9H845 621 aa17.64■□□□□ 0.41
HTT-207ENST00000509751 KIAA0100Q14667 2235 aaKnown RBP17.63■□□□□ 0.41
HTT-207ENST00000509751 HOXC6P09630 235 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
HTT-207ENST00000509751 TROAPQ12815 778 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 USH1GQ495M9 461 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 MTA3Q9BTC8 594 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 SLC5A4Q9NY91 659 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 FBXO40Q9UH90 709 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
HTT-207ENST00000509751 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 CYP2C19P33261 490 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 FGD1P98174 961 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 EXOSC10Q01780 885 aaKnown RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 QRICH1Q2TAL8 776 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 TKFCQ3LXA3 575 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 MFSD14CQ5VZR4 134 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 BLOC1S2Q6QNY1 142 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 NSMFQ6X4W1 530 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
HTT-207ENST00000509751 NAP1L2Q9ULW6 460 aaPredicted RBP17.62■□□□□ 0.41
HTT-207ENST00000509751 DDAH1O94760 285 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 EN2P19622 333 aaPredicted RBP17.61■□□□□ 0.41
HTT-207ENST00000509751 LIFRP42702 1097 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 CACNB2Q08289 660 aaPredicted RBP17.61■□□□□ 0.41
HTT-207ENST00000509751 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 TMTC2Q8N394 836 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 MAML3Q96JK9 1138 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
HTT-207ENST00000509751 A1CFQ9NQ94 594 aaKnown RBP17.61■□□□□ 0.41
HTT-207ENST00000509751 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 SLC12A7Q9Y666 1083 aa17.61■□□□□ 0.41
HTT-207ENST00000509751 NFIBO00712 420 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 SEC24BO95487 1268 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
HTT-207ENST00000509751 CNTN2Q02246 1040 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 ZNF792Q3KQV3 632 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 HMX1Q9NP08 348 aaPredicted RBP17.6■□□□□ 0.41
HTT-207ENST00000509751 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
HTT-207ENST00000509751 RPTORQ8N122 1335 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 KLF18A0A0U1RQI7 1052 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
HTT-207ENST00000509751 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 PSMA5P28066 241 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 CCND3P30281 292 aaPredicted RBP17.59■□□□□ 0.41
HTT-207ENST00000509751 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 Q6ZUG5 572 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
HTT-207ENST00000509751 BRPF3Q9ULD4 1205 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms