RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
HMGCR-208ENST00000509431 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
HMGCR-208ENST00000509431 CACNA1BQ00975 2339 aa16.58■□□□□ 0.25
HMGCR-208ENST00000509431 CACNA1HO95180 2353 aa16.58■□□□□ 0.25
HMGCR-208ENST00000509431 VWA5AO00534 786 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.24
HMGCR-208ENST00000509431 DYNLL1P63167 89 aaKnown RBP16.58■□□□□ 0.24
HMGCR-208ENST00000509431 BEX3Q00994 111 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 TCF15Q12870 199 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 HERC4Q5GLZ8 1057 aaPredicted RBP16.58■□□□□ 0.24
HMGCR-208ENST00000509431 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 GRIN2DO15399 1336 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 SIP14410 1827 aa16.58■□□□□ 0.24
HMGCR-208ENST00000509431 TNKSO95271 1327 aa16.57■□□□□ 0.24
HMGCR-208ENST00000509431 SPICE1Q8N0Z3 855 aa16.57■□□□□ 0.24
HMGCR-208ENST00000509431 TGS1Q96RS0 853 aaKnown RBP16.57■□□□□ 0.24
HMGCR-208ENST00000509431 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
HMGCR-208ENST00000509431 SUGCTQ9HAC7 445 aa16.57■□□□□ 0.24
HMGCR-208ENST00000509431 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
HMGCR-208ENST00000509431 ZFHX2Q9C0A1 2572 aaPredicted RBP16.56■□□□□ 0.24
HMGCR-208ENST00000509431 KCNJ6P48051 423 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 ERVK-21P61565 698 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 GABPAQ06546 454 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
HMGCR-208ENST00000509431 IER5LQ5T953 404 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 SPRED2Q7Z698 418 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 SUGP1Q8IWZ8 645 aaKnown RBP16.56■□□□□ 0.24
HMGCR-208ENST00000509431 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
HMGCR-208ENST00000509431 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 PPP1R9AQ9ULJ8 1098 aa16.56■□□□□ 0.24
HMGCR-208ENST00000509431 CYP7A1P22680 504 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 IRS1P35568 1242 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 PLCD1P51178 756 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 TNFAIP2Q03169 654 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 NOL8Q76FK4 1167 aaKnown RBP16.55■□□□□ 0.24
HMGCR-208ENST00000509431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
HMGCR-208ENST00000509431 ARMCX2Q7L311 632 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 TLK2Q86UE8 772 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 REPS2Q8NFH8 660 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 EDAQ92838 391 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 TEX13BQ9BXU2 312 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 PTPRSQ13332 1948 aa16.55■□□□□ 0.24
HMGCR-208ENST00000509431 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
HMGCR-208ENST00000509431 PBXIP1Q96AQ6 731 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 ZBED2Q9BTP6 218 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGCR-208ENST00000509431 SNRKQ9NRH2 765 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 GNEQ9Y223 722 aaKnown RBP16.54■□□□□ 0.24
HMGCR-208ENST00000509431 TET1Q8NFU7 2136 aa16.54■□□□□ 0.24
HMGCR-208ENST00000509431 FAM186AA6NE01 2351 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 MYH8P13535 1937 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 ASTN1O14525 1302 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
HMGCR-208ENST00000509431 CYP2E1P05181 493 aaPredicted RBP16.53■□□□□ 0.24
HMGCR-208ENST00000509431 ICA1Q05084 483 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 TIGD5Q53EQ6 642 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
HMGCR-208ENST00000509431 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 KATNBL1Q9H079 304 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 MUTYHQ9UIF7 546 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 Q9Y3F1 56 aa16.53■□□□□ 0.24
HMGCR-208ENST00000509431 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 RIF1Q5UIP0 2472 aaKnown RBP16.52■□□□□ 0.24
HMGCR-208ENST00000509431 PROB1E7EW31 1015 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 CYP2C9P11712 490 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 PTPROQ16827 1216 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 SNRNP48Q6IEG0 339 aaKnown RBP16.52■□□□□ 0.24
HMGCR-208ENST00000509431 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
HMGCR-208ENST00000509431 MRPL38Q96DV4 380 aaKnown RBP16.52■□□□□ 0.24
HMGCR-208ENST00000509431 RAD9AQ99638 391 aa16.52■□□□□ 0.24
HMGCR-208ENST00000509431 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
HMGCR-208ENST00000509431 NAV1Q8NEY1 1877 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 TMEM221A6NGB7 291 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 M0R296 226 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 PSMC6P62333 389 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 CCDC158Q5M9N0 1113 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 ATOH1Q92858 354 aaPredicted RBP16.51■□□□□ 0.23
HMGCR-208ENST00000509431 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
HMGCR-208ENST00000509431 FAM86C1Q9NVL1 165 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 MTUS1Q9ULD2 1270 aa16.51■□□□□ 0.23
HMGCR-208ENST00000509431 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
HMGCR-208ENST00000509431 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
HMGCR-208ENST00000509431 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 ID4P47928 161 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
HMGCR-208ENST00000509431 BFSP2Q13515 415 aa16.5■□□□□ 0.23
HMGCR-208ENST00000509431 COL19A1Q14993 1142 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms