RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CCDC96Q2M329 555 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 PLEKHN1Q494U1 663 aaPredicted RBP5.84□□□□□ -1.47
NIPBL-206ENST00000509429 GALNT18Q6P9A2 607 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 ZC3H14Q6PJT7 736 aaKnown RBP5.84□□□□□ -1.47
NIPBL-206ENST00000509429 LIMS2Q7Z4I7 341 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 MRPL41Q8IXM3 137 aaKnown RBP5.84□□□□□ -1.47
NIPBL-206ENST00000509429 SDR16C5Q8N3Y7 309 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 MTA3Q9BTC8 594 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 UBA5Q9GZZ9 404 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 IKZF4Q9H2S9 585 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 SLC52A1Q9NWF4 448 aa5.84□□□□□ -1.47
NIPBL-206ENST00000509429 ZNF536O15090 1300 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 PAGE1O75459 146 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 MAPKAPK2P49137 400 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
NIPBL-206ENST00000509429 BHLHA9Q7RTU4 235 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 TRIM44Q96DX7 344 aaPredicted RBP5.83□□□□□ -1.48
NIPBL-206ENST00000509429 SH3BP1Q9Y3L3 701 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 DCAF1Q9Y4B6 1507 aa5.83□□□□□ -1.48
NIPBL-206ENST00000509429 CALRP27797 417 aaKnown RBP5.82□□□□□ -1.48
NIPBL-206ENST00000509429 SARSP49591 514 aaKnown RBP5.82□□□□□ -1.48
NIPBL-206ENST00000509429 FKBP4Q02790 459 aaKnown RBP eCLIP5.82□□□□□ -1.48
NIPBL-206ENST00000509429 KIR3DS1Q14943 382 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 LONRF3Q496Y0 759 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 RASIP1Q5U651 963 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.82□□□□□ -1.48
NIPBL-206ENST00000509429 EPS8L3Q8TE67 593 aaKnown RBP5.82□□□□□ -1.48
NIPBL-206ENST00000509429 MORC4Q8TE76 937 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 ZNF341Q9BYN7 854 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 TNFRSF12AQ9NP84 129 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 CYP8B1Q9UNU6 501 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 HDAC5Q9UQL6 1122 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 RPS6KL1Q9Y6S9 549 aa5.82□□□□□ -1.48
NIPBL-206ENST00000509429 SHISA3A0PJX4 238 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 EIF1AYO14602 144 aaKnown RBP5.81□□□□□ -1.48
NIPBL-206ENST00000509429 ENC1O14682 589 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
NIPBL-206ENST00000509429 PPFIA4O75335 1185 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 SRPK2P78362 688 aaKnown RBP5.81□□□□□ -1.48
NIPBL-206ENST00000509429 DPTQ07507 201 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 ICAM4Q14773 271 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 SLC6A19Q695T7 634 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 PALM2Q8IXS6 379 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 ANP32BQ92688 251 aaKnown RBP5.81□□□□□ -1.48
NIPBL-206ENST00000509429 CD248Q9HCU0 757 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 TJP2Q9UDY2 1190 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 INVSQ9Y283 1065 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 FAN1Q9Y2M0 1017 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 TAF6LQ9Y6J9 622 aa5.81□□□□□ -1.48
NIPBL-206ENST00000509429 WTIPA6NIX2 430 aaPredicted RBP5.8□□□□□ -1.48
NIPBL-206ENST00000509429 NPIPB8E9PQR5 432 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 ANP32CO43423 234 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 LRRN2O75325 713 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 ATF2P15336 505 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 CYP4F8P98187 520 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 PTPN11Q06124 597 aaPredicted RBP5.8□□□□□ -1.48
NIPBL-206ENST00000509429 NR1I3Q14994 352 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 CLEC16AQ2KHT3 1053 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 DPY19L2P1Q6NXN4 242 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 KRBA2Q6ZNG9 492 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 LGI4Q8N135 537 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
NIPBL-206ENST00000509429 CCDC97Q96F63 343 aaPredicted RBP5.8□□□□□ -1.48
NIPBL-206ENST00000509429 DRC1Q96MC2 740 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 CRAMP1Q96RY5 1269 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 SERPINA10Q9UK55 444 aa5.8□□□□□ -1.48
NIPBL-206ENST00000509429 CCER2I3L3R5 266 aa5.79□□□□□ -1.48
NIPBL-206ENST00000509429 FOXD4Q12950 439 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-206ENST00000509429 HSF5Q4G112 596 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-206ENST00000509429 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-206ENST00000509429 USHBP1Q8N6Y0 703 aa5.79□□□□□ -1.48
NIPBL-206ENST00000509429 TMEM87BQ96K49 555 aa5.79□□□□□ -1.48
NIPBL-206ENST00000509429 NTMQ9P121 344 aa5.79□□□□□ -1.48
NIPBL-206ENST00000509429 EXOC5O00471 708 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 KIAA2012Q0VF49 1180 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 AMER2Q8N7J2 671 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 EVI5LQ96CN4 794 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 TSPAN18Q96SJ8 248 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 CEP44Q9C0F1 390 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 MAGEC2Q9UBF1 373 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-206ENST00000509429 PRDM4Q9UKN5 801 aa5.78□□□□□ -1.48
NIPBL-206ENST00000509429 TMEM82A0PJX8 343 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 RAB11FIP3O75154 756 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 PRKCAP17252 672 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 KCNA1Q09470 495 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 ZNF585AQ6P3V2 769 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 TPTE2Q6XPS3 522 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-206ENST00000509429 ADAMTS17Q8TE56 1095 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 MKL1Q969V6 931 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 BCO2Q9BYV7 579 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 RNF38Q9H0F5 515 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 TNFRSF10DQ9UBN6 386 aa5.77□□□□□ -1.49
NIPBL-206ENST00000509429 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 APPP05067 770 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 IL12RB1P42701 662 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 KRTAP10-11P60412 298 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 CALD1Q05682 793 aaKnown RBP5.76□□□□□ -1.49
NIPBL-206ENST00000509429 ABHD18Q0P651 414 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms