RNA–Protein interactions for RNA: ENST00000508139.1

FGFR4-210, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 5

Gene FGFR4, Length 720 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-210ENST00000508139 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.67■□□□□ 0.9
FGFR4-210ENST00000508139 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.67■□□□□ 0.9
FGFR4-210ENST00000508139 SPC25Q9HBM1 224 aa20.67■□□□□ 0.9
FGFR4-210ENST00000508139 ARVCFO00192 962 aa20.66■□□□□ 0.9
FGFR4-210ENST00000508139 TLR3O15455 904 aaKnown RBP20.66■□□□□ 0.9
FGFR4-210ENST00000508139 CYP2C18P33260 490 aa20.66■□□□□ 0.9
FGFR4-210ENST00000508139 CTR9Q6PD62 1173 aa20.66■□□□□ 0.9
FGFR4-210ENST00000508139 FAM126BQ8IXS8 530 aa20.66■□□□□ 0.9
FGFR4-210ENST00000508139 UPF3AQ9H1J1 476 aaKnown RBP20.66■□□□□ 0.9
FGFR4-210ENST00000508139 NKX2-4Q9H2Z4 354 aa20.66■□□□□ 0.9
FGFR4-210ENST00000508139 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
FGFR4-210ENST00000508139 NDUFB10O96000 172 aa20.65■□□□□ 0.9
FGFR4-210ENST00000508139 RRP1P56182 461 aaKnown RBP20.65■□□□□ 0.9
FGFR4-210ENST00000508139 GNASQ5JWF2 1037 aa20.65■□□□□ 0.9
FGFR4-210ENST00000508139 IL27Q8NEV9 243 aa20.65■□□□□ 0.9
FGFR4-210ENST00000508139 FGD4Q96M96 766 aa20.65■□□□□ 0.9
FGFR4-210ENST00000508139 UHRF1Q96T88 793 aaPredicted RBP20.65■□□□□ 0.9
FGFR4-210ENST00000508139 RAVER2Q9HCJ3 691 aaKnown RBP20.65■□□□□ 0.9
FGFR4-210ENST00000508139 CXXC1Q9P0U4 656 aaPredicted RBP20.65■□□□□ 0.9
FGFR4-210ENST00000508139 MSRAQ9UJ68 235 aa20.65■□□□□ 0.9
FGFR4-210ENST00000508139 PRRC2BQ5JSZ5 2229 aaKnown RBP20.64■□□□□ 0.89
FGFR4-210ENST00000508139 GJA9P57773 515 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 MRPS5P82675 430 aaKnown RBP20.64■□□□□ 0.89
FGFR4-210ENST00000508139 BEX3Q00994 111 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 RAB30Q15771 203 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 ARMCX2Q7L311 632 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 ZNF467Q7Z7K2 595 aaPredicted RBP20.64■□□□□ 0.89
FGFR4-210ENST00000508139 ANKRD35Q8N283 1001 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 KIFC2Q96AC6 838 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 ABHD16BQ9H3Z7 469 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 IL23AQ9NPF7 189 aa20.64■□□□□ 0.89
FGFR4-210ENST00000508139 UMODL1Q5DID0 1318 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 F5H6K3 240 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 ZBED4O75132 1171 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 RASA1P20936 1047 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 KLRC3Q07444 240 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 PRPF38AQ8NAV1 312 aaKnown RBP20.63■□□□□ 0.89
FGFR4-210ENST00000508139 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
FGFR4-210ENST00000508139 ARPP21Q9UBL0 812 aaPredicted RBP20.63■□□□□ 0.89
FGFR4-210ENST00000508139 YBX2Q9Y2T7 364 aaKnown RBP20.63■□□□□ 0.89
FGFR4-210ENST00000508139 UBE3CQ15386 1083 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 MICALL1Q8N3F8 863 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 HERVK_113Q902F9 699 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 HAUS7Q99871 368 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 PUS7LQ9H0K6 701 aaKnown RBP20.62■□□□□ 0.89
FGFR4-210ENST00000508139 HOMER2Q9NSB8 354 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
FGFR4-210ENST00000508139 TANC1Q9C0D5 1861 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.61■□□□□ 0.89
FGFR4-210ENST00000508139 CTAGE5O15320 804 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 CD4P01730 458 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 ATP5JP18859 108 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 CXCL17Q6UXB2 119 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 NOL8Q76FK4 1167 aaKnown RBP20.61■□□□□ 0.89
FGFR4-210ENST00000508139 OTOP2Q7RTS6 562 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 NECAB3Q96P71 396 aaPredicted RBP20.61■□□□□ 0.89
FGFR4-210ENST00000508139 LRRCC1Q9C099 1032 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
FGFR4-210ENST00000508139 HIPK3Q9H422 1215 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 SLC28A3Q9HAS3 691 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 MKNK2Q9HBH9 465 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 NYAP2Q9P242 653 aa20.61■□□□□ 0.89
FGFR4-210ENST00000508139 ATP2A1O14983 1001 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 FGBP02675 491 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 RABGGTBP53611 331 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 CNTN2Q02246 1040 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 KATNBL1Q9H079 304 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 SLC38A10Q9HBR0 1119 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 CLIP2Q9UDT6 1046 aa20.6■□□□□ 0.89
FGFR4-210ENST00000508139 ASTN1O14525 1302 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 COL4A4P53420 1690 aaPredicted RBP20.59■□□□□ 0.89
FGFR4-210ENST00000508139 MINDY4BA8MYZ0 360 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 SMARCA5O60264 1052 aaPredicted RBP20.59■□□□□ 0.89
FGFR4-210ENST00000508139 PTGS1P23219 599 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 CCL23P55773 120 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 LRRC47Q8N1G4 583 aaKnown RBP20.59■□□□□ 0.89
FGFR4-210ENST00000508139 FBXO40Q9UH90 709 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
FGFR4-210ENST00000508139 TRANK1O15050 2925 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 PTPRSQ13332 1948 aa20.59■□□□□ 0.89
FGFR4-210ENST00000508139 TRIP12Q14669 1992 aaPredicted RBP20.58■□□□□ 0.89
FGFR4-210ENST00000508139 TNFAIP2Q03169 654 aa20.58■□□□□ 0.89
FGFR4-210ENST00000508139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.58■□□□□ 0.89
FGFR4-210ENST00000508139 TLK2Q86UE8 772 aa20.58■□□□□ 0.89
FGFR4-210ENST00000508139 CHST13Q8NET6 341 aa20.58■□□□□ 0.89
FGFR4-210ENST00000508139 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
FGFR4-210ENST00000508139 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
FGFR4-210ENST00000508139 XIRP2A4UGR9 3374 aa20.57■□□□□ 0.88
FGFR4-210ENST00000508139 MYOGP15173 224 aa20.57■□□□□ 0.88
FGFR4-210ENST00000508139 PPP2R2DQ66LE6 453 aa20.57■□□□□ 0.88
FGFR4-210ENST00000508139 ZSCAN25Q6NSZ9 544 aa20.57■□□□□ 0.88
FGFR4-210ENST00000508139 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
FGFR4-210ENST00000508139 ZBBXA8MT70 800 aa20.56■□□□□ 0.88
FGFR4-210ENST00000508139 PRDM1O75626 825 aa20.56■□□□□ 0.88
FGFR4-210ENST00000508139 PLA2G5P39877 138 aa20.56■□□□□ 0.88
FGFR4-210ENST00000508139 ITGA7Q13683 1181 aa20.56■□□□□ 0.88
FGFR4-210ENST00000508139 FSCN1Q16658 493 aaKnown RBP20.56■□□□□ 0.88
FGFR4-210ENST00000508139 SBK1Q52WX2 424 aa20.56■□□□□ 0.88
FGFR4-210ENST00000508139 SLC43A3Q8NBI5 491 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms