RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TRANK1O15050 2925 aa16.75■□□□□ 0.27
DDR1-260ENST00000507533 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 NAV1Q8NEY1 1877 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 CABYRO75952 493 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 CA3P07451 260 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 NKX3-2P78367 333 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
DDR1-260ENST00000507533 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 ARMCX2Q7L311 632 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
DDR1-260ENST00000507533 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
DDR1-260ENST00000507533 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
DDR1-260ENST00000507533 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 PRKAB2O43741 272 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 KRT40Q6A162 431 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 NOL8Q76FK4 1167 aaKnown RBP16.73■□□□□ 0.27
DDR1-260ENST00000507533 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 ANKRD35Q8N283 1001 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 HLA-CQ95604 372 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 SCLYQ96I15 445 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 FGD4Q96M96 766 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
DDR1-260ENST00000507533 ARMT1Q9H993 441 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 PARP14Q460N5 1801 aa16.73■□□□□ 0.27
DDR1-260ENST00000507533 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.72■□□□□ 0.27
DDR1-260ENST00000507533 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 EPOPA6NHQ4 379 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 B4GALT4O60513 344 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 AACSQ86V21 672 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 VWCEQ96DN2 955 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 ATP8A2Q9NTI2 1148 aa16.72■□□□□ 0.27
DDR1-260ENST00000507533 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
DDR1-260ENST00000507533 ASTN1O14525 1302 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 GBF1Q92538 1859 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 ATP2A1O14983 1001 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 ZBED4O75132 1171 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
DDR1-260ENST00000507533 ARNTL2Q8WYA1 636 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
DDR1-260ENST00000507533 PIEZO1Q92508 2521 aa16.7■□□□□ 0.26
DDR1-260ENST00000507533 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
DDR1-260ENST00000507533 USP17L21D6R901 530 aa16.7■□□□□ 0.26
DDR1-260ENST00000507533 FSCN1Q16658 493 aaKnown RBP16.7■□□□□ 0.26
DDR1-260ENST00000507533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDR1-260ENST00000507533 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
DDR1-260ENST00000507533 RAVER2Q9HCJ3 691 aaKnown RBP16.7■□□□□ 0.26
DDR1-260ENST00000507533 FBXO40Q9UH90 709 aa16.7■□□□□ 0.26
DDR1-260ENST00000507533 GOLIM4O00461 696 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 DYNC1LI2O43237 492 aaPredicted RBP16.69■□□□□ 0.26
DDR1-260ENST00000507533 ZEB2O60315 1214 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 PFKMP08237 780 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 PSMC6P62333 389 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 CNTN2Q02246 1040 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 TLK2Q86UE8 772 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
DDR1-260ENST00000507533 GNEQ9Y223 722 aaKnown RBP16.69■□□□□ 0.26
DDR1-260ENST00000507533 PRRC2BQ5JSZ5 2229 aaKnown RBP16.69■□□□□ 0.26
DDR1-260ENST00000507533 F5H6K3 240 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 MBD4O95243 580 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 TAP1Q03518 808 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 KLRC3Q07444 240 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 KIFC2Q96AC6 838 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
DDR1-260ENST00000507533 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDR1-260ENST00000507533 CD320Q9NPF0 282 aa16.68■□□□□ 0.26
DDR1-260ENST00000507533 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 ARHGEF15O94989 841 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 NDUFB10O96000 172 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 ACTN1P12814 892 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 PTGS1P23219 599 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 GRB10Q13322 594 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 PHOSPHO2Q8TCD6 241 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 SLC9A7Q96T83 725 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
DDR1-260ENST00000507533 SLC38A10Q9HBR0 1119 aa16.67■□□□□ 0.26
DDR1-260ENST00000507533 MUC6Q6W4X9 2439 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 PRR33A8MZF0 331 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 KIF28PB7ZC32 967 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 CYP2C9P11712 490 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 SMPD1P17405 629 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 MRE11P49959 708 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms