RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 ANKS1AQ92625 1134 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 LSG1Q9H089 658 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 ZNF536O15090 1300 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 TRPV1Q8NER1 839 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 NCOA7Q8NI08 942 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 PAWRQ96IZ0 340 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 TRERF1Q96PN7 1200 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 ACAD9Q9H845 621 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 RNF146Q9NTX7 359 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
CCHCR1-222ENST00000507459 IGHA2P01877 340 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 CYBAP13498 195 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 CAPN2P17655 700 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 LHX8Q68G74 356 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 DIS3LQ8TF46 1054 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 DPF3Q92784 378 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 TINF2Q9BSI4 451 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 RANBP17Q9H2T7 1088 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 OGDHLQ9ULD0 1010 aa16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-222ENST00000507459 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 CDC45O75419 566 aa16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 TKFCQ3LXA3 575 aa16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 ANO1Q5XXA6 986 aa16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-222ENST00000507459 PLXNA1Q9UIW2 1896 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 DNAJC25-GNG10A0A024R161 153 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 ERICH2A1L162 156 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 SLC27A2O14975 620 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 ICAM1P05362 532 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 PARP1P09874 1014 aaKnown RBP16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 SEC23AQ15436 765 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 MUM1L1Q5H9M0 696 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 ANKLE1Q8NAG6 615 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
CCHCR1-222ENST00000507459 POTEB2H3BUK9 544 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 DHX16O60231 1041 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 MSCO60682 206 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 NSMFQ6X4W1 530 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 VAT1LQ9HCJ6 419 aa16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-222ENST00000507459 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 SEPT4O43236 478 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 WTAPQ15007 396 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
CCHCR1-222ENST00000507459 ANTXR2P58335 489 aa16.52■□□□□ 0.24
CCHCR1-222ENST00000507459 MB21D2Q8IYB1 491 aaPredicted RBP16.52■□□□□ 0.24
CCHCR1-222ENST00000507459 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
CCHCR1-222ENST00000507459 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
CCHCR1-222ENST00000507459 C11orf49Q9H6J7 331 aa16.52■□□□□ 0.24
CCHCR1-222ENST00000507459 PFASO15067 1338 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 NFIBO00712 420 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 SNAI1O95863 264 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 USH1GQ495M9 461 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 GJC2Q5T442 439 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 FGD4Q96M96 766 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 ZHX1Q9UKY1 873 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-222ENST00000507459 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 PRC1O43663 620 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 ARMCX2Q7L311 632 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
CCHCR1-222ENST00000507459 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms