RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 NFXL1Q6ZNB6 911 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 KCNB2Q92953 911 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 SENP2Q9HC62 589 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 HOMER2Q9NSB8 354 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 CCPG1Q9ULG6 757 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 CCDC69A6NI79 296 aa23.18■■□□□ 1.3
DDR1-259ENST00000507046 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
DDR1-259ENST00000507046 ICAM1P05362 532 aa23.18■■□□□ 1.3
DDR1-259ENST00000507046 AGBL1Q96MI9 1066 aa23.18■■□□□ 1.3
DDR1-259ENST00000507046 ACAD9Q9H845 621 aa23.18■■□□□ 1.3
DDR1-259ENST00000507046 RNF146Q9NTX7 359 aa23.18■■□□□ 1.3
DDR1-259ENST00000507046 RBBP6Q7Z6E9 1792 aaKnown RBP23.17■■□□□ 1.3
DDR1-259ENST00000507046 DDAH1O94760 285 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 ALAS1P13196 640 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 CCL5P13501 91 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 LIFRP42702 1097 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 GRM4Q14833 912 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 MTFR1Q15390 333 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 CCL14Q16627 93 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 ADCK5Q3MIX3 580 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDR1-259ENST00000507046 DHX32Q7L7V1 743 aaKnown RBP23.17■■□□□ 1.3
DDR1-259ENST00000507046 NPLOC4Q8TAT6 608 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 UBA5Q9GZZ9 404 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 SNX14Q9Y5W7 946 aa23.17■■□□□ 1.3
DDR1-259ENST00000507046 MFSD14CQ5VZR4 134 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 ZNF654Q8IZM8 581 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 ANKRD35Q8N283 1001 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 NUP133Q8WUM0 1156 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 DDX11Q96FC9 970 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 TRERF1Q96PN7 1200 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 RNF208Q9H0X6 261 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 CPVLQ9H3G5 476 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 MAD2L2Q9UI95 211 aa23.16■■□□□ 1.3
DDR1-259ENST00000507046 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 COBLO75128 1261 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 TROAPQ12815 778 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 COL9A3Q14050 684 aaPredicted RBP23.15■■□□□ 1.3
DDR1-259ENST00000507046 CDC37Q16543 378 aaPredicted RBP23.15■■□□□ 1.3
DDR1-259ENST00000507046 OLFML2BQ68BL8 750 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 ADGRF4Q8IZF3 695 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 STAG2Q8N3U4 1231 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 JAKMIP1Q96N16 626 aaKnown RBP23.15■■□□□ 1.3
DDR1-259ENST00000507046 USP26Q9BXU7 913 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 LRRC2Q9BYS8 371 aa23.15■■□□□ 1.3
DDR1-259ENST00000507046 GPHNQ9NQX3 736 aaPredicted RBP23.15■■□□□ 1.3
DDR1-259ENST00000507046 PALM3A6NDB9 673 aaPredicted RBP23.14■■□□□ 1.29
DDR1-259ENST00000507046 PGK2P07205 417 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 PRKAR2AP13861 404 aaKnown RBP23.14■■□□□ 1.29
DDR1-259ENST00000507046 PSMA5P28066 241 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 KIF5BP33176 963 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 CTCFLQ8NI51 663 aaPredicted RBP23.14■■□□□ 1.29
DDR1-259ENST00000507046 MAP3K14Q99558 947 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 UNC93B1Q9H1C4 597 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 FLRT1Q9NZU1 646 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 DIS3Q9Y2L1 958 aaKnown RBP23.14■■□□□ 1.29
DDR1-259ENST00000507046 SLC12A7Q9Y666 1083 aa23.14■■□□□ 1.29
DDR1-259ENST00000507046 RPTORQ8N122 1335 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 CALM1P0DP23 149 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 CALM2P0DP24 149 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 CALM3P0DP25 149 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 EXOSC10Q01780 885 aaKnown RBP23.13■■□□□ 1.29
DDR1-259ENST00000507046 TRIM32Q13049 653 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 BLOC1S2Q6QNY1 142 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 SYNE3Q6ZMZ3 975 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
DDR1-259ENST00000507046 HMX1Q9NP08 348 aaPredicted RBP23.13■■□□□ 1.29
DDR1-259ENST00000507046 PFASO15067 1338 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 POTEFA5A3E0 1075 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 FGD1P98174 961 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 ZNF792Q3KQV3 632 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 MAP3K21Q5TCX8 1036 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 SGMS1Q86VZ5 419 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 TCEANC2Q96MN5 208 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 MYL10Q9BUA6 226 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.12■■□□□ 1.299e-6■■■■■ 32.4
DDR1-259ENST00000507046 JMJD4Q9H9V9 463 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 VAT1LQ9HCJ6 419 aa23.12■■□□□ 1.29
DDR1-259ENST00000507046 ZNFX1Q9P2E3 1918 aaKnown RBP23.12■■□□□ 1.29
DDR1-259ENST00000507046 GJB1P08034 283 aa23.11■■□□□ 1.29
DDR1-259ENST00000507046 CACNB2Q08289 660 aaPredicted RBP23.11■■□□□ 1.29
DDR1-259ENST00000507046 A1CFQ9NQ94 594 aaKnown RBP23.11■■□□□ 1.29
DDR1-259ENST00000507046 PLXNA1Q9UIW2 1896 aa23.11■■□□□ 1.29
DDR1-259ENST00000507046 DNAJC25-GNG10A0A024R161 153 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 TAL1P17542 331 aaPredicted RBP23.1■■□□□ 1.29
DDR1-259ENST00000507046 CASTP20810 708 aaKnown RBP23.1■■□□□ 1.29
DDR1-259ENST00000507046 CYP2C19P33261 490 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 GNAQP50148 359 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 QRICH1Q2TAL8 776 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 USH1GQ495M9 461 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 MUM1L1Q5H9M0 696 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 NSMFQ6X4W1 530 aa23.1■■□□□ 1.29
DDR1-259ENST00000507046 PAK6Q9NQU5 681 aaPredicted RBP23.1■■□□□ 1.29
DDR1-259ENST00000507046 POTEB2H3BUK9 544 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 RPS6KB1P23443 525 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 MICU3Q86XE3 530 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 FBXO11Q86XK2 927 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 LZTS2Q9BRK4 669 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 CENPFP49454 3210 aa23.09■■□□□ 1.29
DDR1-259ENST00000507046 ABCB11O95342 1321 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms