RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CTCFLQ8NI51 663 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 SMCR8Q8TEV9 937 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 PHKBQ93100 1093 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 JMJD4Q9H9V9 463 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 RAVER2Q9HCJ3 691 aaKnown RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 FEM1BQ9UK73 627 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 PPP1R9AQ9ULJ8 1098 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 STAT2P52630 851 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 EVCP57679 992 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 SCRN1Q12765 414 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 PLS1Q14651 629 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 TMEM132BQ14DG7 1078 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 OTUD7BQ6GQQ9 843 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 CCDC83Q8IWF9 413 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 FBXL16Q8N461 479 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 AGBL1Q96MI9 1066 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 PIGSQ96S52 555 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 ALDH8A1Q9H2A2 487 aaPredicted RBP10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 LIMCH1Q9UPQ0 1083 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 SMCHD1A6NHR9 2005 aa10.28□□□□□ -0.76
SCAMP1-202ENST00000506858 VWA5AO00534 786 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 CA12O43570 354 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 PABPC4Q13310 644 aaKnown RBP eCLIP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 ASPRV1Q53RT3 343 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 BTNL9Q6UXG8 535 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 CHURC1Q8WUH1 139 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 ZFYVE28Q9HCC9 887 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 WBP1LQ9NX94 342 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 RIPK3Q9Y572 518 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 LOC285556D6RIA3 1793 aa10.27□□□□□ -0.77
SCAMP1-202ENST00000506858 RLFQ13129 1914 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 ST18O60284 1047 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 JAK2O60674 1132 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 PFKFB2O60825 505 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 PPP1R11O60927 126 aaPredicted RBP10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 CTDNEP1O95476 244 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 CTGFP29279 349 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 FOSBP53539 338 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 FUT2Q10981 343 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 ANKRD1Q15327 319 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 GPATCH4Q5T3I0 446 aaKnown RBP10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 C17orf99Q6UX52 265 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 REPS2Q8NFH8 660 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 TMX3Q96JJ7 454 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 ARHGAP39Q9C0H5 1083 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 PORCNQ9H237 461 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 HOMER2Q9NSB8 354 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 PNMA3Q9UL41 463 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 ZNF536O15090 1300 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 ADGRA2Q96PE1 1338 aa10.26□□□□□ -0.77
SCAMP1-202ENST00000506858 TLR2O60603 784 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CALM1P0DP23 149 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CALM2P0DP24 149 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CALM3P0DP25 149 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 KIF5BP33176 963 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 NTRK3Q16288 839 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 CDC37Q16543 378 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 USH1GQ495M9 461 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 LBX2Q6XYB7 198 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 COA7Q96BR5 231 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 SLC26A6Q9BXS9 759 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 RIOX1Q9H6W3 641 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 GJB4Q9NTQ9 266 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 SLC45A1Q9Y2W3 748 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 FOXN1O15353 648 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 ZBED4O75132 1171 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 HSPA1AP0DMV8 641 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 HSPA1BP0DMV9 641 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 BCRP11274 1271 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 ALAS1P13196 640 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 ERVK-24P63145 666 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 MAP2K1Q02750 393 aaPredicted RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 WDR78Q5VTH9 848 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 GPKOWQ92917 476 aaPredicted RBP eCLIP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 MOV10L1Q9BXT6 1211 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 RANBP17Q9H2T7 1088 aaKnown RBP10.25□□□□□ -0.77
SCAMP1-202ENST00000506858 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms