RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 HOMER2Q9NSB8 354 aa17.02■□□□□ 0.32
CDC42SE2-209ENST00000506419 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 RARBP10826 455 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 PDE4AP27815 886 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 IRX5P78411 483 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
CDC42SE2-209ENST00000506419 ZMYM6O95789 1325 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 ADAMTS4O75173 837 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 TOP1P11387 765 aaKnown RBP17■□□□□ 0.31
CDC42SE2-209ENST00000506419 AKR1A1P14550 325 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 SLC16A2P36021 539 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
CDC42SE2-209ENST00000506419 ACVR2BQ13705 512 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 DCAF4Q8WV16 495 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 TRERF1Q96PN7 1200 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 UBE2OQ9C0C9 1292 aaKnown RBP17■□□□□ 0.31
CDC42SE2-209ENST00000506419 KATNBL1Q9H079 304 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 A1CFQ9NQ94 594 aaKnown RBP17■□□□□ 0.31
CDC42SE2-209ENST00000506419 RNF146Q9NTX7 359 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 CDKN2AIPQ9NXV6 580 aaPredicted RBP17■□□□□ 0.31
CDC42SE2-209ENST00000506419 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 PHF24Q9UPV7 400 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
CDC42SE2-209ENST00000506419 ADCY6O43306 1168 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 ALAS1P13196 640 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 SNX17Q15036 470 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 TRIM60Q495X7 471 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 MFSD6Q6ZSS7 791 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 KLHDC9Q8NEP7 349 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
CDC42SE2-209ENST00000506419 MYH4Q9Y623 1939 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 TKFCQ3LXA3 575 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 C1orf53Q5VUE5 145 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 RNF180Q86T96 592 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 TTC14Q96N46 770 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 IL25Q9H293 177 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
CDC42SE2-209ENST00000506419 ASTN1O14525 1302 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 FRMPD2Q68DX3 1309 aaPredicted RBP16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 MYADML2A6NDP7 307 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 ZNF213O14771 459 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 MFAP1P55081 439 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 TLE2Q04725 743 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 LRIT3Q3SXY7 679 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 ARMCX2Q7L311 632 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 PURBQ96QR8 312 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
CDC42SE2-209ENST00000506419 NEDD4P46934 1319 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 DUSP11O75319 330 aaKnown RBP16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 PDHBP11177 359 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 KCNA10Q16322 511 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 CCDC144BQ3MJ40 725 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 TSEN34Q9BSV6 310 aaKnown RBP16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
CDC42SE2-209ENST00000506419 FRMPD3Q5JV73 1810 aa16.96■□□□□ 0.3
CDC42SE2-209ENST00000506419 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.3
CDC42SE2-209ENST00000506419 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 CTAGE5O15320 804 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 ICAM1P05362 532 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 GSPT1P15170 499 aaKnown RBP16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 ITGB8P26012 769 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 ACLYP53396 1101 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 PDLIM7Q9NR12 457 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 CCPG1Q9ULG6 757 aa16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 LAMA2P24043 3122 aaKnown RBP16.95■□□□□ 0.3
CDC42SE2-209ENST00000506419 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE2-209ENST00000506419 HIP1O00291 1037 aa16.94■□□□□ 0.3
CDC42SE2-209ENST00000506419 PTGS1P23219 599 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms