RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 UPF2Q9HAU5 1272 aaKnown RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PRDM9Q9NQV7 894 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 GPSM3Q9Y4H4 160 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PCDHAC2Q9Y5I4 1007 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PRDX5P30044 214 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 MASP1P48740 699 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 GPSM2P81274 684 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 CCDC57Q2TAC2 916 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 FAM196AQ6ZSG2 479 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 ERMP1Q7Z2K6 904 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 FOXP4Q8IVH2 680 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 TDRD7Q8NHU6 1098 aaKnown RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 RTFDC1Q9BY42 306 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 ANKRD18BA2A2Z9 1011 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 RAB33AQ14088 237 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 PTPRNQ16849 979 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 SYTL4Q96C24 671 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 ARHGAP9Q9BRR9 750 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 GRPEL1Q9HAV7 217 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 KBTBD4Q9NVX7 518 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 STIM2Q9P246 746 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 PTPRFP10586 1907 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 ST18O60284 1047 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 EIF3JO75822 258 aaKnown RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 IGFBP4P22692 258 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 GNALP38405 381 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 SCNN1DP51172 638 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 WDR75Q8IWA0 830 aaKnown RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 ETFBKMTQ8IXQ9 262 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 BRF1Q92994 677 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 KCNF1Q9H3M0 494 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 ARMT1Q9H993 441 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 HPSEQ9Y251 543 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 A0A087WWV3 80 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 A0A087X0B3 334 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 MAFGO15525 162 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 SH3BP5O60239 455 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 JAG1P78504 1218 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 CAMKK2Q96RR4 588 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 DIAPH3Q9NSV4 1193 aa6.91□□□□□ -1.3
SCLT1-207ENST00000506233 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
SCLT1-207ENST00000506233 NMT2O60551 498 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 NR1I2O75469 434 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 CYP2D6P10635 497 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 HAND2P61296 217 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 MECOMQ03112 1051 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 TROAPQ12815 778 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 SLC9C2Q5TAH2 1124 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 OTUD7BQ6GQQ9 843 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 DNAJC18Q9H819 358 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 CYP46A1Q9Y6A2 500 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 COL11A1P12107 1806 aaPredicted RBP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 XIRP2A4UGR9 3374 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 HIP1O00291 1037 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 FANCGO15287 622 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 HOXB3P14651 431 aaPredicted RBP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 MAMSTRQ6ZN01 415 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 C4orf32Q8N8J7 132 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 SDR42E1Q8WUS8 393 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 LEO1Q8WVC0 666 aaPredicted RBP6.9□□□□□ -1.3
SCLT1-207ENST00000506233 NEUROD6Q96NK8 337 aa6.9□□□□□ -1.3
SCLT1-207ENST00000506233 IGKV6D-41A0A0C4DH26 115 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 PLSCR1O15162 318 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 NUCB2P80303 420 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 METTL24Q5JXM2 366 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 SIAH1Q8IUQ4 282 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 STK11IPQ8N1F8 1099 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 THAP11Q96EK4 314 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 RCOR1Q9UKL0 485 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 PCDHB11Q9Y5F2 797 aa6.9□□□□□ -1.31
SCLT1-207ENST00000506233 GAKO14976 1311 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 CYTH3O43739 400 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 UBE4AQ14139 1066 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 IQCB1Q15051 598 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 EPS8L3Q8TE67 593 aaKnown RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 ADAMTS1Q9UHI8 967 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 CLIC4Q9Y696 253 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 FAM205CA6NFA0 338 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 SLC5A1P13866 664 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms