RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 UBASH3AP57075 661 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 IL17AQ16552 155 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 ISM2Q6H9L7 571 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 RSBN1LQ6PCB5 846 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 ZSCAN29Q8IWY8 852 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 GMCL1P1Q8NEA9 526 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 PRIMPOLQ96LW4 560 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 HSD3B7Q9H2F3 369 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 KCND1Q9NSA2 647 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 NRBP1Q9UHY1 535 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 SIPA1L1O43166 1804 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 STAT6P42226 847 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 CCDC96Q2M329 555 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 FKBP1CQ5VVH2 108 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 UBA5Q9GZZ9 404 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 JMJD4Q9H9V9 463 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 PYCARDQ9ULZ3 195 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 CCDC144BQ3MJ40 725 aa19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 RAB34Q9BZG1 259 aa19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 DNAJC18Q9H819 358 aa19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 VAT1LQ9HCJ6 419 aa19.54■□□□□ 0.72
TRAPPC11-204ENST00000505676 C21orf2O43822 256 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 VIL1P09327 827 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 GCFC2P16383 781 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 ZNF18P17022 549 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 AFMP43652 599 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 TRAF1Q13077 416 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 DNTTIP2Q5QJE6 756 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 RRAGBQ5VZM2 374 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 CCDC112Q8NEF3 446 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 CUL5Q93034 780 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 MYH4Q9Y623 1939 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 DDTLA6NHG4 134 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 PPP1R2P41236 205 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 SPATA1Q5VX52 437 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 TBCKQ8TEA7 893 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 GPCPD1Q9NPB8 672 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 FANCLQ9NW38 375 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 NFE2L3Q9Y4A8 694 aa19.53■□□□□ 0.72
TRAPPC11-204ENST00000505676 ADAMTS3O15072 1205 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 SLC26A4O43511 780 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 ICA1Q05084 483 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 KCNB1Q14721 858 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 CCDC47Q96A33 483 aaKnown RBP19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 CTAGE1Q96RT6 745 aa19.52■□□□□ 0.72
TRAPPC11-204ENST00000505676 YDJCA8MPS7 323 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 SLC1A4P43007 532 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 TCP10Q12799 353 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 TMEM266Q2M3C6 531 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 LETM2Q2VYF4 491 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 FILIP1Q7Z7B0 1213 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 ZFPM1Q8IX07 1006 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 GRAMD1CQ8IYS0 662 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 OGFOD1Q8N543 542 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 MTMR14Q8NCE2 650 aa19.52■□□□□ 0.71
TRAPPC11-204ENST00000505676 EEF2P13639 858 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 EIF6P56537 245 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 RBM26Q5T8P6 1007 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 SH3BP5LQ7L8J4 393 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 TMC6Q7Z403 805 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 AGBL3Q8NEM8 1001 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 RASSF8Q8NHQ8 419 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 TMEM60Q9H2L4 133 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 CPVLQ9H3G5 476 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 SPDYE2BA6NHP3 402 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 SPDYE6P0CI01 402 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 CLK2P49760 499 aaKnown RBP19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.714e-9■■□□□ 13.6
TRAPPC11-204ENST00000505676 TGFB2P61812 414 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 AMPD3Q01432 767 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 CUL4BQ13620 913 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 ZNF658Q5TYW1 1059 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 SLFN13Q68D06 897 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 RASGRP2Q7LDG7 609 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 VSTM4Q8IW00 320 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 LARGE2Q8N3Y3 721 aa19.51■□□□□ 0.71
TRAPPC11-204ENST00000505676 SYNRGQ9UMZ2 1314 aa19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 CDK11BP21127 795 aaKnown RBP19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 ATP2B2Q01814 1243 aa19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 SPAG1Q07617 926 aa19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 GMLQ99445 158 aa19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
TRAPPC11-204ENST00000505676 CCP110O43303 1012 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 SKILP12757 684 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 PDIA5Q14554 519 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 IGSF22Q8N9C0 903 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 FAM151AQ8WW52 585 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 KBTBD4Q9NVX7 518 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms