RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ARAP1Q96P48 1450 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 CYR61O00622 381 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 EIF1AYO14602 144 aaKnown RBP5.55□□□□□ -1.52
RFC1-208ENST00000504849 GIPC1O14908 333 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 RAB11FIP3O75154 756 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 ITGB3P05106 788 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 ZNF20P17024 532 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 EIF4BP23588 611 aaKnown RBP5.55□□□□□ -1.52
RFC1-208ENST00000504849 GDF5P43026 501 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 CAP1Q01518 475 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 TEKQ02763 1124 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 ZNF394Q53GI3 561 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 RNF187Q5TA31 235 aaPredicted RBP5.55□□□□□ -1.52
RFC1-208ENST00000504849 SETDB2Q96T68 719 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 TMX1Q9H3N1 280 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 RRBP1Q9P2E9 1410 aaKnown RBP5.55□□□□□ -1.52
RFC1-208ENST00000504849 SYNJ1O43426 1573 aa5.55□□□□□ -1.52
RFC1-208ENST00000504849 RAPGEF2Q9Y4G8 1499 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 ENC1O14682 589 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 XRCC5P13010 732 aaKnown RBP5.54□□□□□ -1.52
RFC1-208ENST00000504849 ATF4P18848 351 aaPredicted RBP5.54□□□□□ -1.52
RFC1-208ENST00000504849 LTKP29376 864 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 PTPN11Q06124 597 aaPredicted RBP5.54□□□□□ -1.52
RFC1-208ENST00000504849 TCEAL1Q15170 157 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 LDHDQ86WU2 507 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 HID1Q8IV36 788 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 CKAP2LQ8IYA6 745 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 MKL1Q969V6 931 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 MRFAP1L1Q96HT8 127 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 GPATCH3Q96I76 525 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.54□□□□□ -1.528e-8■■□□□ 14.1
RFC1-208ENST00000504849 NOP58Q9Y2X3 529 aaKnown RBP5.54□□□□□ -1.52
RFC1-208ENST00000504849 USP31Q70CQ4 1352 aa5.54□□□□□ -1.52
RFC1-208ENST00000504849 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
RFC1-208ENST00000504849 ANAPC15P60006 121 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 BMS1Q14692 1282 aaKnown RBP5.53□□□□□ -1.52
RFC1-208ENST00000504849 CCDC181Q5TID7 509 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 JAZF1Q86VZ6 243 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 LSRQ86X29 649 aaPredicted RBP5.53□□□□□ -1.52
RFC1-208ENST00000504849 DNAJB8Q8NHS0 232 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 PLPPR2Q96GM1 343 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 GGT7Q9UJ14 662 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 PCDHGB7Q9Y5F8 929 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 CCNB3Q8WWL7 1395 aa5.53□□□□□ -1.52
RFC1-208ENST00000504849 ENPP3O14638 875 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 DUSP4Q13115 394 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 HNRNPA0Q13151 305 aaKnown RBP5.52□□□□□ -1.53
RFC1-208ENST00000504849 VWA3BQ502W6 1294 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 LLGL2Q6P1M3 1020 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 CRIP3Q6Q6R5 217 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 DTWD2Q8NBA8 298 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 C3orf58Q8NDZ4 430 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 RASGRP4Q8TDF6 673 aa5.52□□□□□ -1.53
RFC1-208ENST00000504849 NCAPD3P42695 1498 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 CDK8P49336 464 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 SERINC3Q13530 473 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 TAF1CQ15572 869 aaPredicted RBP5.51□□□□□ -1.53
RFC1-208ENST00000504849 NT5DC1Q5TFE4 455 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 SCARA3Q6AZY7 606 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 ADGRG2Q8IZP9 1017 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 GPRASP2Q96D09 838 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 SEC16BQ96JE7 1060 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 SRCIN1Q9C0H9 1055 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 C12orf49Q9H741 205 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 KLHL14Q9P2G3 628 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 AKAP2Q9Y2D5 859 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 TOP2BQ02880 1626 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 PRXQ9BXM0 1461 aa5.51□□□□□ -1.53
RFC1-208ENST00000504849 CCER2I3L3R5 266 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 NRDCO43847 1150 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 USP2O75604 605 aaPredicted RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 IGFBP6P24592 240 aaPredicted RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 ETF1P62495 437 aaKnown RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 PAK2Q13177 524 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 DPH2Q9BQC3 489 aaPredicted RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 BCO2Q9BYV7 579 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 PCED1AQ9H1Q7 454 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 FAM8A1Q9UBU6 413 aa5.5□□□□□ -1.53
RFC1-208ENST00000504849 MRPL42Q9Y6G3 142 aaKnown RBP5.5□□□□□ -1.53
RFC1-208ENST00000504849 KIF27Q86VH2 1401 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 PDS5BQ9NTI5 1447 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 MAP3K1Q13233 1512 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 A0A1B0GTL3 188 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 FBLN1P23142 703 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 ETV3P41162 512 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 ERMP1Q7Z2K6 904 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 C8orf49Q96NF6 230 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 SPATA25Q9BR10 227 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 SIRPGQ9P1W8 387 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 PRKAB1Q9Y478 270 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 KIF21AQ7Z4S6 1674 aa5.49□□□□□ -1.53
RFC1-208ENST00000504849 BIVM-ERCC5R4GMW8 1640 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms