RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NKX3-2P78367 333 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 BEX3Q00994 111 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 ITGA7Q13683 1181 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 TMEM67Q5HYA8 995 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 CXCL17Q6UXB2 119 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 ARMCX2Q7L311 632 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 ANKRD35Q8N283 1001 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 ATP8A2Q9NTI2 1148 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 CTDP1Q9Y5B0 961 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 XIRP2A4UGR9 3374 aa19.06■□□□□ 0.64
PDLIM7-210ENST00000503827 RFXAPO00287 272 aa19.05■□□□□ 0.64
PDLIM7-210ENST00000503827 CTAGE5O15320 804 aa19.05■□□□□ 0.64
PDLIM7-210ENST00000503827 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-210ENST00000503827 NOC4LQ9BVI4 516 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-210ENST00000503827 TNFAIP2Q03169 654 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 AACSQ86V21 672 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 ALYREFQ86V81 257 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 PRPF38AQ8NAV1 312 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 HLA-CQ95604 372 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 WNT8AQ9H1J5 351 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 ARMT1Q9H993 441 aa19.04■□□□□ 0.64
PDLIM7-210ENST00000503827 TRANK1O15050 2925 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 TCRBV5S4A2TA0A5A2 114 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 ZEB2O60315 1214 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 ZBED4O75132 1171 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 CA3P07451 260 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 PFKMP08237 780 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 C12orf60Q5U649 245 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 TMEM57Q8N5G2 664 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 FGD4Q96M96 766 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 NUP88Q99567 741 aaPredicted RBP19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 TRPV6Q9H1D0 765 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 C1orf115Q9H7X2 142 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 C11orf16Q9NQ32 467 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
PDLIM7-210ENST00000503827 FAM86C2PA6NEL3 165 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 PRKAB2O43741 272 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 B4GALT4O60513 344 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 DDRGK1Q96HY6 314 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 SCLYQ96I15 445 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 KATNBL1Q9H079 304 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 AP5M1Q9H0R1 490 aa19.02■□□□□ 0.64
PDLIM7-210ENST00000503827 MYH4Q9Y623 1939 aa19.02■□□□□ 0.63
PDLIM7-210ENST00000503827 SCN5AQ14524 2016 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 USP17L12C9JPN9 530 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 USP17L21D6R901 530 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 FSCN1Q16658 493 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 TLK2Q86UE8 772 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 CHST13Q8NET6 341 aa19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 KHSRPQ92945 711 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 GREB1LQ9C091 1923 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-210ENST00000503827 ASTN1O14525 1302 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 GRIN2DO15399 1336 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 C11orf97A0A1B0GVM6 126 aaPredicted RBP19■□□□□ 0.63
PDLIM7-210ENST00000503827 PI4K2BG5E9Z4 385 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 SMIM22K7EJ46 135 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 GOLIM4O00461 696 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 MBD4O95243 580 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 ACTN1P12814 892 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 TTLL4Q14679 1199 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 KRT40Q6A162 431 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 ARNTL2Q8WYA1 636 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 DNAJC2Q99543 621 aaKnown RBP19■□□□□ 0.63
PDLIM7-210ENST00000503827 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
PDLIM7-210ENST00000503827 MUC6Q6W4X9 2439 aa19■□□□□ 0.63
PDLIM7-210ENST00000503827 EPOPA6NHQ4 379 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 F5H6K3 240 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 KLRC3Q07444 240 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 KIFC2Q96AC6 838 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 VWCEQ96DN2 955 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 SLC9A7Q96T83 725 aa18.99■□□□□ 0.63
PDLIM7-210ENST00000503827 MYH7P12883 1935 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 PIEZO1Q92508 2521 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 DYNC1LI2O43237 492 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 NDUFB10O96000 172 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 SUPT20HL2P0C7V6 817 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 DEFB128Q7Z7B8 93 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 PHOSPHO2Q8TCD6 241 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 SLC38A10Q9HBR0 1119 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 EXOC6BQ9Y2D4 811 aa18.98■□□□□ 0.63
PDLIM7-210ENST00000503827 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 ASB14A6NK59 587 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 KIF28PB7ZC32 967 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 OAZ1P54368 228 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 PSMC6P62333 389 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 CNTN2Q02246 1040 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 TAP1Q03518 808 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms