RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FER1L6Q2WGJ9 1857 aa24.26■■□□□ 1.47
UBE2D3-216ENST00000503742 ICA1Q05084 483 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 MORC3Q14149 939 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 REXO1Q8N1G1 1221 aaKnown RBP24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 OGFOD1Q8N543 542 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 MTMR14Q8NCE2 650 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 PAGE5Q96GU1 130 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 PYM1Q9BRP8 204 aaKnown RBP24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 PPP1R11O60927 126 aaPredicted RBP24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 PRPHP41219 470 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 SPDYE2Q495Y8 402 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 MTFR1LQ9H019 292 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 HERC5Q9UII4 1024 aaKnown RBP24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 ARFGEF1Q9Y6D6 1849 aa24.25■■□□□ 1.47
UBE2D3-216ENST00000503742 TCP10L2B9ZVM9 353 aa24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 GDF11O95390 407 aa24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 JAG1P78504 1218 aa24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 RRP1BQ14684 758 aaKnown RBP24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 NEK8Q86SG6 692 aa24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 FAM151AQ8WW52 585 aa24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 ATF5Q9Y2D1 282 aaPredicted RBP24.24■■□□□ 1.47
UBE2D3-216ENST00000503742 CLRN2A0PK11 232 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 USP17L10C9JJH3 530 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 ZBTB5O15062 677 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 SLC16A2P36021 539 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 ADCY7P51828 1080 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 DALRD3Q5D0E6 543 aaKnown RBP24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 SLFN13Q68D06 897 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 DTHD1Q6ZMT9 781 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 IQUBQ8NA54 791 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 HSD3B7Q9H2F3 369 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 KCNF1Q9H3M0 494 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 BIN2Q9UBW5 565 aaPredicted RBP24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 CNTNAP1P78357 1384 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 POLD1P28340 1107 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 CXCL9Q07325 125 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 ORC2Q13416 577 aaPredicted RBP24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 FKBP1CQ5VVH2 108 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 GMCL1P1Q8NEA9 526 aa24.23■■□□□ 1.47
UBE2D3-216ENST00000503742 SMC2O95347 1197 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 SLC1A4P43007 532 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 TPM4P67936 248 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 MYL5Q02045 173 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 RBM26Q5T8P6 1007 aaKnown RBP24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 JAKMIP3Q5VZ66 844 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 PDXDC2PQ6P474 469 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 DRC7Q8IY82 874 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 MLKLQ8NB16 471 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 TBCKQ8TEA7 893 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 RIC8AQ9NPQ8 531 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 DPYDQ12882 1025 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 ZBED3Q96IU2 234 aaPredicted RBP24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 TMEM260Q9NX78 707 aa24.22■■□□□ 1.47
UBE2D3-216ENST00000503742 GH2P01242 217 aa24.21■■□□□ 1.47
UBE2D3-216ENST00000503742 AFMP43652 599 aa24.21■■□□□ 1.47
UBE2D3-216ENST00000503742 LETM2Q2VYF4 491 aa24.21■■□□□ 1.47
UBE2D3-216ENST00000503742 CCDC186Q7Z3E2 898 aa24.21■■□□□ 1.47
UBE2D3-216ENST00000503742 NRBP1Q9UHY1 535 aa24.21■■□□□ 1.47
UBE2D3-216ENST00000503742 F5H6K3 240 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 CCNT1O60563 726 aaKnown RBP24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 PTGS1P23219 599 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 CLK2P49760 499 aaKnown RBP24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 KLRC3Q07444 240 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 GMCL1Q96IK5 515 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 TAOK3Q9H2K8 898 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 SYNPO2Q9UMS6 1093 aa24.2■■□□□ 1.46
UBE2D3-216ENST00000503742 EDIL3O43854 480 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 OR52Z1P0C646 297 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 TXLNAP40222 546 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 GSDMAQ96QA5 445 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 CCSER1Q9C0I3 900 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 DACH1Q9UI36 760 aa24.19■■□□□ 1.46
UBE2D3-216ENST00000503742 NEMFO60524 1076 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 MTRQ99707 1265 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 NDUFB10O96000 172 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 CDC25AP30304 524 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 QRICH1Q2TAL8 776 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 CCDC144BQ3MJ40 725 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 CIAPIN1Q6FI81 312 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 FAM83AQ86UY5 434 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 AK8Q96MA6 479 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 DISC1Q9NRI5 854 aa24.18■■□□□ 1.46
UBE2D3-216ENST00000503742 NFKBIEO00221 500 aa24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 MYO1BO43795 1136 aa24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 CASP1P29466 404 aa24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 LMOD1P29536 600 aaPredicted RBP24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 CT47A1Q5JQC4 288 aaPredicted RBP24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 CUL5Q93034 780 aa24.17■■□□□ 1.46
UBE2D3-216ENST00000503742 A0A1W2PRG0 241 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 RAD21O60216 631 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 TBC1D12O60347 775 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 MRPL12P52815 198 aaKnown RBP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 KARSQ15046 597 aaKnown RBP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 PP2D1A8MPX8 630 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 GTPBP6O43824 516 aaPredicted RBP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 NAALADL2Q58DX5 795 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms