RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.94■□□□□ 0.62
DDR1-250ENST00000503628 SLF1Q9BQI6 1058 aa18.94■□□□□ 0.62
DDR1-250ENST00000503628 UPF3AQ9H1J1 476 aaKnown RBP18.94■□□□□ 0.62
DDR1-250ENST00000503628 SLC28A3Q9HAS3 691 aa18.94■□□□□ 0.62
DDR1-250ENST00000503628 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.94■□□□□ 0.62
DDR1-250ENST00000503628 CD4P01730 458 aa18.93■□□□□ 0.62
DDR1-250ENST00000503628 FGBP02675 491 aa18.93■□□□□ 0.62
DDR1-250ENST00000503628 ADD2P35612 726 aa18.93■□□□□ 0.62
DDR1-250ENST00000503628 CPXCR1Q8N123 301 aa18.93■□□□□ 0.62
DDR1-250ENST00000503628 NECAB3Q96P71 396 aaPredicted RBP18.93■□□□□ 0.62
DDR1-250ENST00000503628 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDR1-250ENST00000503628 ABHD16BQ9H3Z7 469 aa18.93■□□□□ 0.62
DDR1-250ENST00000503628 YBX2Q9Y2T7 364 aaKnown RBP18.93■□□□□ 0.62
DDR1-250ENST00000503628 FGD4Q96M96 766 aa18.92■□□□□ 0.62
DDR1-250ENST00000503628 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
DDR1-250ENST00000503628 CTAGE5O15320 804 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 CHGBP05060 677 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 BMP1P13497 986 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 BEX3Q00994 111 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 CTR9Q6PD62 1173 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 OTOP2Q7RTS6 562 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
DDR1-250ENST00000503628 PRPF38AQ8NAV1 312 aaKnown RBP18.91■□□□□ 0.62
DDR1-250ENST00000503628 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
DDR1-250ENST00000503628 MTIF3Q9H2K0 278 aaKnown RBP18.91■□□□□ 0.62
DDR1-250ENST00000503628 PAG1Q9NWQ8 432 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 UMODL1Q5DID0 1318 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 XIRP2A4UGR9 3374 aa18.91■□□□□ 0.62
DDR1-250ENST00000503628 F5H6K3 240 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 IFIT2P09913 472 aaKnown RBP18.9■□□□□ 0.62
DDR1-250ENST00000503628 RABGGTBP53611 331 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 KLRC3Q07444 240 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 ARMCX2Q7L311 632 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 ANKRD35Q8N283 1001 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 HIPK3Q9H422 1215 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 RAVER2Q9HCJ3 691 aaKnown RBP18.9■□□□□ 0.62
DDR1-250ENST00000503628 SLC4A4Q9Y6R1 1079 aa18.9■□□□□ 0.62
DDR1-250ENST00000503628 TRANK1O15050 2925 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 ATP2A1O14983 1001 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 ZBED4O75132 1171 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 NDUFB10O96000 172 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 CCL23P55773 120 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 TFF2Q03403 129 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 AAMPQ13685 434 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 CCDC144CPQ8IYA2 1237 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 SLC43A3Q8NBI5 491 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
DDR1-250ENST00000503628 CTDP1Q9Y5B0 961 aaPredicted RBP18.89■□□□□ 0.61
DDR1-250ENST00000503628 GREB1LQ9C091 1923 aaPredicted RBP18.89■□□□□ 0.61
DDR1-250ENST00000503628 MYOGP15173 224 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 NKX3-2P78367 333 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 CXCL17Q6UXB2 119 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDR1-250ENST00000503628 KIFC2Q96AC6 838 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.88■□□□□ 0.611e-7■■■■■ 30.8
DDR1-250ENST00000503628 KATNBL1Q9H079 304 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 PCDHB15Q9Y5E8 787 aa18.88■□□□□ 0.61
DDR1-250ENST00000503628 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.87■□□□□ 0.61
DDR1-250ENST00000503628 ASTN1O14525 1302 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 PPP2R2DQ66LE6 453 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
DDR1-250ENST00000503628 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 C1QTNF1Q9BXJ1 281 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 SLC4A7Q9Y6M7 1214 aa18.87■□□□□ 0.61
DDR1-250ENST00000503628 MYH7P12883 1935 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 MYH4Q9Y623 1939 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 GRIN2DO15399 1336 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 RASA1P20936 1047 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 KCNQ1P51787 676 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 ITGA7Q13683 1181 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 UBE3CQ15386 1083 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 CHST13Q8NET6 341 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 CLIP2Q9UDT6 1046 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 FBXO40Q9UH90 709 aa18.86■□□□□ 0.61
DDR1-250ENST00000503628 CABYRO75952 493 aa18.85■□□□□ 0.61
DDR1-250ENST00000503628 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
DDR1-250ENST00000503628 PUS7LQ9H0K6 701 aaKnown RBP18.85■□□□□ 0.61
DDR1-250ENST00000503628 WNT8AQ9H1J5 351 aa18.85■□□□□ 0.61
DDR1-250ENST00000503628 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
DDR1-250ENST00000503628 PCDHA11Q9Y5I1 949 aa18.85■□□□□ 0.61
DDR1-250ENST00000503628 PRRC2BQ5JSZ5 2229 aaKnown RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 B4GALT4O60513 344 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 RAB11FIP3O75154 756 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 ATP5JP18859 108 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 PTGS1P23219 599 aa18.84■□□□□ 0.61
DDR1-250ENST00000503628 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 IRX6P78412 446 aaPredicted RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 SKIV2LQ15477 1246 aaKnown RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 FSCN1Q16658 493 aaKnown RBP18.84■□□□□ 0.61
DDR1-250ENST00000503628 AAK1Q2M2I8 961 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms