RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 EPB41L2O43491 1005 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 DHX16O60231 1041 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 COBLO75128 1261 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 HMGCRP04035 888 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 INHAP05111 366 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 ICAM1P05362 532 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 PGK2P07205 417 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 HMGB1P09429 215 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 ALAS1P13196 640 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 MTFR1Q15390 333 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 CCL14Q16627 93 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 TRMT44Q8IYL2 757 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 STAG2Q8N3U4 1231 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 CHST13Q8NET6 341 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 NPLOC4Q8TAT6 608 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 NUP133Q8WUM0 1156 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 TRIB2Q92519 343 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 KCNB2Q92953 911 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 TCEANC2Q96MN5 208 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 JAKMIP1Q96N16 626 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 TRERF1Q96PN7 1200 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 RANBP17Q9H2T7 1088 aaKnown RBP8.52□□□□□ -1.05
USP46-203ENST00000502443 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 SLC5A4Q9NY91 659 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 FBXO40Q9UH90 709 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 CCPG1Q9ULG6 757 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 SNX14Q9Y5W7 946 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 SMCHD1A6NHR9 2005 aa8.52□□□□□ -1.05
USP46-203ENST00000502443 MYH6P13533 1939 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 POTEFA5A3E0 1075 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 PALM3A6NDB9 673 aaPredicted RBP8.51□□□□□ -1.05
USP46-203ENST00000502443 HOXC6P09630 235 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 CCL5P13501 91 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 CPA1P15085 419 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 PSMA5P28066 241 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 LIFRP42702 1097 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 FGD1P98174 961 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
USP46-203ENST00000502443 TROAPQ12815 778 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 TRIM32Q13049 653 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 GRM4Q14833 912 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 TKFCQ3LXA3 575 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 MFSD14CQ5VZR4 134 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 ZNF654Q8IZM8 581 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 ANKRD35Q8N283 1001 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 CTCFLQ8NI51 663 aaPredicted RBP8.51□□□□□ -1.05
USP46-203ENST00000502443 MYL10Q9BUA6 226 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 ACAD9Q9H845 621 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 RNF146Q9NTX7 359 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 FLRT1Q9NZU1 646 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 MAD2L2Q9UI95 211 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 SLC12A7Q9Y666 1083 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 ZNF236Q9UL36 1845 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 PLXNA1Q9UIW2 1896 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
USP46-203ENST00000502443 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 DDAH1O94760 285 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CALM1P0DP23 149 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CALM2P0DP24 149 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CALM3P0DP25 149 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 TAL1P17542 331 aaPredicted RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 RXRAP19793 462 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CASTP20810 708 aaKnown RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 KIF5BP33176 963 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CDC37Q16543 378 aaPredicted RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 USH1GQ495M9 461 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 MUM1L1Q5H9M0 696 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 BLOC1S2Q6QNY1 142 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 SYNE3Q6ZMZ3 975 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 RAB11FIP4Q86YS3 637 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 CCDC144CPQ8IYA2 1237 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 MAML3Q96JK9 1138 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 MAP3K14Q99558 947 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
USP46-203ENST00000502443 PNMA2Q9UL42 364 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
USP46-203ENST00000502443 DNAJC25-GNG10A0A024R161 153 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 RPS6KB1P23443 525 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 CYP2C19P33261 490 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 CACNB2Q08289 660 aaPredicted RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 ZNF792Q3KQV3 632 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 MAP3K21Q5TCX8 1036 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 OLFML2BQ68BL8 750 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 APOA5Q6Q788 366 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 NSMFQ6X4W1 530 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
USP46-203ENST00000502443 SGMS1Q86VZ5 419 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 MICU3Q86XE3 530 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 DEFB118Q96PH6 123 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms