RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 PRR12Q9ULL5 1215 aa18.8■□□□□ 0.6
LMNA-217ENST00000498722 LIMCH1Q9UPQ0 1083 aa18.8■□□□□ 0.6
LMNA-217ENST00000498722 KIAA0100Q14667 2235 aaKnown RBP18.8■□□□□ 0.6
LMNA-217ENST00000498722 RBBP6Q7Z6E9 1792 aaKnown RBP18.79■□□□□ 0.6
LMNA-217ENST00000498722 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
LMNA-217ENST00000498722 PLA2G6O60733 806 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
LMNA-217ENST00000498722 FDX1P10109 184 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 PTPREP23469 700 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 DDIT3P35638 169 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 RGS2P41220 211 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 IRF5Q13568 498 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 CUL4AQ13619 759 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 GPATCH4Q5T3I0 446 aaKnown RBP18.79■□□□□ 0.6
LMNA-217ENST00000498722 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 NFXL1Q6ZNB6 911 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
LMNA-217ENST00000498722 HOMER2Q9NSB8 354 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 GJD2Q9UKL4 321 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 MCM3APO60318 1980 aa18.79■□□□□ 0.6
LMNA-217ENST00000498722 SNHG28P0DPA3 235 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 FCER1AP12319 257 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 COPB2P35606 906 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 MAP2K5Q13163 448 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 ASPRV1Q53RT3 343 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 MORN1Q5T089 497 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 DPP9Q86TI2 863 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
LMNA-217ENST00000498722 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
LMNA-217ENST00000498722 STRNO43815 780 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 ADORA2AP29274 412 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 OAZ1P54368 228 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 IGDCC4Q8TDY8 1250 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 TMEM87BQ96K49 555 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 MMP19Q99542 508 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 APBA2Q99767 749 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 CPVLQ9H3G5 476 aa18.77■□□□□ 0.6
LMNA-217ENST00000498722 CCDC69A6NI79 296 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 SOX10P56693 466 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 UBXN2AP68543 259 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 FGD1P98174 961 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 GRB14Q14449 540 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 KCTD2Q14681 263 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 BTNL9Q6UXG8 535 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
LMNA-217ENST00000498722 PXYLP1Q8TE99 480 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 NUP133Q8WUM0 1156 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 ZNF333Q96JL9 665 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 AGBL1Q96MI9 1066 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 LY9Q9HBG7 655 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
LMNA-217ENST00000498722 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 RIPK3Q9Y572 518 aa18.76■□□□□ 0.59
LMNA-217ENST00000498722 ATP2A1O14983 1001 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 HMGCRP04035 888 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 INHAP05111 366 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 ALAS1P13196 640 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 CPA1P15085 419 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 COL9A3Q14050 684 aaPredicted RBP18.75■□□□□ 0.59
LMNA-217ENST00000498722 TCEANC2Q96MN5 208 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 TMEM106CQ9BVX2 250 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 CCPG1Q9ULG6 757 aa18.75■□□□□ 0.59
LMNA-217ENST00000498722 SH2B2O14492 632 aaPredicted RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 XRCC5P13010 732 aaKnown RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 NUCB2P80303 420 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 CCL14Q16627 93 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 DHX32Q7L7V1 743 aaKnown RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 ZNF654Q8IZM8 581 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 TRIB2Q92519 343 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 USP6NLQ92738 828 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 MTA3Q9BTC8 594 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 MYL10Q9BUA6 226 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 RANBP17Q9H2T7 1088 aaKnown RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 VAT1LQ9HCJ6 419 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 FBXO40Q9UH90 709 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 KLRF2D3W0D1 207 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 ICAM1P05362 532 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 PGK2P07205 417 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 GRM4Q14833 912 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 TRMT44Q8IYL2 757 aaKnown RBP18.74■□□□□ 0.59
LMNA-217ENST00000498722 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 ANKRD35Q8N283 1001 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 STAG2Q8N3U4 1231 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 CHST13Q8NET6 341 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 TRERF1Q96PN7 1200 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 ACAD9Q9H845 621 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 RNF146Q9NTX7 359 aa18.74■□□□□ 0.59
LMNA-217ENST00000498722 ZNF536O15090 1300 aa18.73■□□□□ 0.59
LMNA-217ENST00000498722 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
LMNA-217ENST00000498722 MTFR1Q15390 333 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms