RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ANKRD35Q8N283 1001 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 CHST13Q8NET6 341 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 DIAPH3Q9NSV4 1193 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 RNF146Q9NTX7 359 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 PRR12Q9ULL5 1215 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 CNPY2Q9Y2B0 182 aa17.82■□□□□ 0.44
NEK4-206ENST00000496822 PLA2G6O60733 806 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 FDX1P10109 184 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 RARBP10826 455 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 AKR1A1P14550 325 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 BMP8BP34820 402 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 ADCYAP1R1P41586 468 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 CNTN2Q02246 1040 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 TTBK2Q6IQ55 1244 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 MAMDC4Q6UXC1 1216 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 IL25Q9H293 177 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
NEK4-206ENST00000496822 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
NEK4-206ENST00000496822 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 LAMA4Q16363 1823 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 TOP1P11387 765 aaKnown RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 SLC16A2P36021 539 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 MFAP1P55081 439 aaKnown RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 SLC39A5Q6ZMH5 540 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 ZNF467Q7Z7K2 595 aaPredicted RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 DCAF4Q8WV16 495 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 LRCH3Q96II8 777 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 ACAD9Q9H845 621 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 A1CFQ9NQ94 594 aaKnown RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
NEK4-206ENST00000496822 ATP11BQ9Y2G3 1177 aa17.8■□□□□ 0.44
NEK4-206ENST00000496822 ADCY6O43306 1168 aa17.79■□□□□ 0.44
NEK4-206ENST00000496822 ALAS1P13196 640 aa17.79■□□□□ 0.44
NEK4-206ENST00000496822 MDM2Q00987 491 aaPredicted RBP17.79■□□□□ 0.44
NEK4-206ENST00000496822 TRIM60Q495X7 471 aa17.79■□□□□ 0.44
NEK4-206ENST00000496822 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
NEK4-206ENST00000496822 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
NEK4-206ENST00000496822 ASTN1O14525 1302 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 SYNRGQ9UMZ2 1314 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 ADAMTS4O75173 837 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 PDHBP11177 359 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 IRX5P78411 483 aaPredicted RBP17.78■□□□□ 0.44
NEK4-206ENST00000496822 SNX17Q15036 470 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 FAM133AQ8N9E0 248 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 TRERF1Q96PN7 1200 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 UBE2OQ9C0C9 1292 aaKnown RBP17.78■□□□□ 0.44
NEK4-206ENST00000496822 RANBP17Q9H2T7 1088 aaKnown RBP17.78■□□□□ 0.44
NEK4-206ENST00000496822 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 PHF24Q9UPV7 400 aa17.78■□□□□ 0.44
NEK4-206ENST00000496822 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
NEK4-206ENST00000496822 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 SOWAHBA6NEL2 793 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 HIP1O00291 1037 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 ZNF213O14771 459 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 PCP11498 1178 aaKnown RBP17.77■□□□□ 0.44
NEK4-206ENST00000496822 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 TKFCQ3LXA3 575 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 RNF180Q86T96 592 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 KATNBL1Q9H079 304 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
NEK4-206ENST00000496822 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 CCPG1Q9ULG6 757 aa17.77■□□□□ 0.44
NEK4-206ENST00000496822 LTBP2Q14767 1821 aa17.77■□□□□ 0.43
NEK4-206ENST00000496822 LRRC37A2A6NM11 1700 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 A0A1W2PQ45 241 aaPredicted RBP17.76■□□□□ 0.43
NEK4-206ENST00000496822 A0A1W2PQY0 241 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 TTC22Q5TAA0 569 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 TDHQ8IZJ6 230 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 ESR2Q92731 530 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
NEK4-206ENST00000496822 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
NEK4-206ENST00000496822 MCM3APO60318 1980 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 KDM4AO75164 1064 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 ICAM1P05362 532 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 SNHG28P0DPA3 235 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 ZNF543Q08ER8 600 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 PRDM5Q9NQX1 630 aaPredicted RBP17.75■□□□□ 0.43
NEK4-206ENST00000496822 PDLIM7Q9NR12 457 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 CYP39A1Q9NYL5 469 aa17.75■□□□□ 0.43
NEK4-206ENST00000496822 LCTP09848 1927 aa17.74■□□□□ 0.43
NEK4-206ENST00000496822 B4E1Z4 1266 aa17.74■□□□□ 0.43
NEK4-206ENST00000496822 CCSAPQ6IQ19 270 aaPredicted RBP17.74■□□□□ 0.43
NEK4-206ENST00000496822 NSMFQ6X4W1 530 aa17.74■□□□□ 0.43
NEK4-206ENST00000496822 SH3RF1Q7Z6J0 888 aa17.74■□□□□ 0.43
NEK4-206ENST00000496822 KLHDC9Q8NEP7 349 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms