RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 RNF208Q9H0X6 261 aa22.46■■□□□ 1.19
CTDSP1-213ENST00000496785 CCPG1Q9ULG6 757 aa22.46■■□□□ 1.19
CTDSP1-213ENST00000496785 CCDC69A6NI79 296 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 CCL5P13501 91 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 OLFML2BQ68BL8 750 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 ANKRD35Q8N283 1001 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 KCNB2Q92953 911 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 RNF146Q9NTX7 359 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 DIS3Q9Y2L1 958 aaKnown RBP22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 RIPK3Q9Y572 518 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 ZNF536O15090 1300 aa22.45■■□□□ 1.18
CTDSP1-213ENST00000496785 SH2B2O14492 632 aaPredicted RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 DHX16O60231 1041 aaKnown RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 DDAH1O94760 285 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 MYCP01106 439 aaPredicted RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 CALM1P0DP23 149 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 CALM2P0DP24 149 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 CALM3P0DP25 149 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 ALAS1P13196 640 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 HTTP42858 3142 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 DHX32Q7L7V1 743 aaKnown RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 RBBP6Q7Z6E9 1792 aaKnown RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 RPTORQ8N122 1335 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 AGBL1Q96MI9 1066 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 MAP3K14Q99558 947 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 LY9Q9HBG7 655 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 HMX1Q9NP08 348 aaPredicted RBP22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 HOMER2Q9NSB8 354 aa22.44■■□□□ 1.18
CTDSP1-213ENST00000496785 PFASO15067 1338 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 KLRF2D3W0D1 207 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 GJB1P08034 283 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 PSMA5P28066 241 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 KIF5BP33176 963 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 GRM4Q14833 912 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 MTFR1Q15390 333 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 RASEFQ8IZ41 740 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 CTCFLQ8NI51 663 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 NPLOC4Q8TAT6 608 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 TRERF1Q96PN7 1200 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 UBA5Q9GZZ9 404 aa22.43■■□□□ 1.18
CTDSP1-213ENST00000496785 COBLO75128 1261 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 PRKAR2AP13861 404 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 TROAPQ12815 778 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 CCL14Q16627 93 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 SYNE3Q6ZMZ3 975 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 ZNF654Q8IZM8 581 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 UNC93B1Q9H1C4 597 aa22.42■■□□□ 1.18
CTDSP1-213ENST00000496785 PALM3A6NDB9 673 aaPredicted RBP22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 RGS19P49795 217 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 SNAP25P60880 206 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 TRAF1Q13077 416 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 CDC37Q16543 378 aaPredicted RBP22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 MAP3K21Q5TCX8 1036 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 NUP133Q8WUM0 1156 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 MAML3Q96JK9 1138 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 MAD2L2Q9UI95 211 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 SLC12A7Q9Y666 1083 aa22.41■■□□□ 1.18
CTDSP1-213ENST00000496785 GNAQP50148 359 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 FGD1P98174 961 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 ZNF792Q3KQV3 632 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 ADCK5Q3MIX3 580 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 BLOC1S2Q6QNY1 142 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 SGMS1Q86VZ5 419 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 MSL3Q8N5Y2 521 aaKnown RBP22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 JAKMIP1Q96N16 626 aaKnown RBP22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 USP26Q9BXU7 913 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 MAF1Q9H063 256 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 SENP2Q9HC62 589 aa22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 PAK6Q9NQU5 681 aaPredicted RBP22.4■■□□□ 1.18
CTDSP1-213ENST00000496785 DNAJC25-GNG10A0A024R161 153 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 POTEFA5A3E0 1075 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 PGK2P07205 417 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 GJA8P48165 433 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 EXOSC10Q01780 885 aaKnown RBP22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 CACNB2Q08289 660 aaPredicted RBP22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 ZNF467Q7Z7K2 595 aaPredicted RBP22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 STAG2Q8N3U4 1231 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 LZTS2Q9BRK4 669 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 A1CFQ9NQ94 594 aaKnown RBP22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 FLRT1Q9NZU1 646 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 NRBP1Q9UHY1 535 aa22.39■■□□□ 1.17
CTDSP1-213ENST00000496785 POTEB2H3BUK9 544 aa22.38■■□□□ 1.17
CTDSP1-213ENST00000496785 TRIM32Q13049 653 aa22.38■■□□□ 1.17
CTDSP1-213ENST00000496785 ABCB11O95342 1321 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 MSCO60682 206 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 NSMFQ6X4W1 530 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 FBXO11Q86XK2 927 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 U2AF1L4Q8WU68 220 aaKnown RBP22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 TINF2Q9BSI4 451 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 AMNQ9BXJ7 453 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 LRRC2Q9BYS8 371 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 CPVLQ9H3G5 476 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 JMJD4Q9H9V9 463 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 VAT1LQ9HCJ6 419 aa22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 GPHNQ9NQX3 736 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 ZNFX1Q9P2E3 1918 aaKnown RBP22.37■■□□□ 1.17
CTDSP1-213ENST00000496785 SYNGAP1Q96PV0 1343 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms