RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 SDR42E1Q8WUS8 393 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 TEX13BQ9BXU2 312 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 ACAD9Q9H845 621 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 PFASO15067 1338 aa9.8□□□□□ -0.84
VPS13B-206ENST00000496144 TMEM232C9JQI7 657 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 LPXNO60711 386 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 ZNF333Q96JL9 665 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 VCPKMTQ9H867 229 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 WDR19Q8NEZ3 1342 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 TCRBV5S4A2TA0A5A2 114 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 GTPBP6O43824 516 aaPredicted RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 TMEM199Q8N511 208 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 FTOQ9C0B1 505 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 STARD7Q9NQZ5 370 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 PCDH10Q9P2E7 1040 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 MRPL11Q9Y3B7 192 aaKnown RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 GPAA1O43292 621 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 MYL3P08590 195 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 AKR1A1P14550 325 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 KCNJ6P48051 423 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 GNAQP50148 359 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 SLC51AQ86UW1 340 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 DCAF4Q8WV16 495 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 ANP32BQ92688 251 aaKnown RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 CABYRO75952 493 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 EN2P19622 333 aaPredicted RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 RESTQ13127 1097 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 RPUSD2Q8IZ73 545 aaKnown RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 MYH13Q9UKX3 1938 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 ZMYM6O95789 1325 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 JAK2O60674 1132 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 CTDNEP1O95476 244 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 PPARAQ07869 468 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 APOBRQ0VD83 1088 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 FAM83BQ5T0W9 1011 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 BRF1Q92994 677 aa9.79□□□□□ -0.84
VPS13B-206ENST00000496144 ZNF274Q96GC6 653 aaPredicted RBP9.79□□□□□ -0.84
VPS13B-206ENST00000496144 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 M0QZ92 97 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 FIBPO43427 364 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 DTNBO60941 627 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 ATN1P54259 1190 aaPredicted RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 DDX20Q9UHI6 824 aaKnown RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 TFAP4Q01664 338 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 MB21D2Q8IYB1 491 aaPredicted RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 TOP1P11387 765 aaKnown RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 PTPREP23469 700 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 BMS1Q14692 1282 aaKnown RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 LRRC2Q9BYS8 371 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 WTIPA6NIX2 430 aaPredicted RBP9.78□□□□□ -0.84
VPS13B-206ENST00000496144 EVCP57679 992 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 CATSPERGQ6ZRH7 1159 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 GPCPD1Q9NPB8 672 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 XPNPEP3Q9NQH7 507 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 ADGRA2Q96PE1 1338 aa9.78□□□□□ -0.84
VPS13B-206ENST00000496144 NOP56O00567 594 aaKnown RBP9.77□□□□□ -0.84
VPS13B-206ENST00000496144 VCAM1P19320 739 aa9.77□□□□□ -0.84
VPS13B-206ENST00000496144 KRT85P78386 507 aa9.77□□□□□ -0.84
VPS13B-206ENST00000496144 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.84
VPS13B-206ENST00000496144 LCORLQ8N3X6 602 aa9.77□□□□□ -0.84
VPS13B-206ENST00000496144 PDLIM2Q96JY6 352 aa9.77□□□□□ -0.84
VPS13B-206ENST00000496144 ZMYND8Q9ULU4 1186 aaPredicted RBP9.77□□□□□ -0.84
VPS13B-206ENST00000496144 KPNA6O60684 536 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 SUPT20HL2P0C7V6 817 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 GNPTABQ3T906 1256 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 WWC2Q6AWC2 1192 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 RSPH3Q86UC2 560 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 EEF2P13639 858 aaKnown RBP9.77□□□□□ -0.85
VPS13B-206ENST00000496144 ERCC3P19447 782 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 PDIA3P30101 505 aaKnown RBP9.77□□□□□ -0.85
VPS13B-206ENST00000496144 DSG3P32926 999 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 GNL2Q13823 731 aaKnown RBP9.77□□□□□ -0.85
VPS13B-206ENST00000496144 PPIGQ13427 754 aaKnown RBP eCLIP9.77□□□□□ -0.852e-6■■■□□ 15.5
VPS13B-206ENST00000496144 TRIM44Q96DX7 344 aaPredicted RBP9.77□□□□□ -0.85
VPS13B-206ENST00000496144 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 TEPSINQ96N21 525 aa9.77□□□□□ -0.85
VPS13B-206ENST00000496144 XBP1P17861 261 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 CALML3P27482 149 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 TREML2Q5T2D2 321 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 ARHGEF16Q5VV41 709 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 ZSCAN16Q9H4T2 348 aaPredicted RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 NYAP2Q9P242 653 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 FGAP02671 866 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 CCDC84Q86UT8 332 aaPredicted RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 PAWRQ96IZ0 340 aaKnown RBP9.76□□□□□ -0.85
VPS13B-206ENST00000496144 CPT1AP50416 773 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
VPS13B-206ENST00000496144 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms