RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ZNF654Q8IZM8 581 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 TDRD7Q8NHU6 1098 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 FOXP1Q9H334 677 aaPredicted RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 TFIP11Q9UBB9 837 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ROBO3Q96MS0 1386 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 TNKSO95271 1327 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 TNRC6CQ9HCJ0 1690 aaKnown RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 MEN1O00255 615 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ATP9BO43861 1147 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 IL2RAP01589 272 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 GYS1P13807 737 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 U2AF2P26368 475 aaKnown RBP eCLIP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ALDH1B1P30837 517 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 GNAQP50148 359 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 TPM4P67936 248 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 MECOMQ03112 1051 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 TYRO3Q06418 890 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 STX1AQ16623 288 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ANO1Q5XXA6 986 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 LYSMD3Q7Z3D4 306 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 CCAR1Q8IX12 1150 aaKnown RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ELOA2Q8IYF1 753 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 FANCBQ8NB91 859 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 LINC00301Q8NCQ3 95 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 TIGD1Q96MW7 591 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 USP28Q96RU2 1077 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 PYM1Q9BRP8 204 aaKnown RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 ANO10Q9NW15 660 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 MYO5AQ9Y4I1 1855 aaKnown RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
EPHA4-213ENST00000495693 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
EPHA4-213ENST00000495693 A0A0G2JLW4 131 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 KLRG2A4D1S0 409 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-213ENST00000495693 GOLGA6L19H0YKK7 550 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 WFS1O76024 890 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 IL1R1P14778 569 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 CMA1P23946 247 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 PDE6BP35913 854 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 USP5P45974 858 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 PTSQ03393 145 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 KIAA2012Q0VF49 1180 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 CHAF1AQ13111 956 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-213ENST00000495693 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-213ENST00000495693 NTRK3Q16288 839 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 KRT40Q6A162 431 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 DGKHQ86XP1 1220 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 RNF214Q8ND24 703 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 CNKSR1Q969H4 720 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 SLC26A6Q9BXS9 759 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 DCP1AQ9NPI6 582 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-213ENST00000495693 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.82
EPHA4-213ENST00000495693 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
EPHA4-213ENST00000495693 IRS2Q9Y4H2 1338 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 DLEC1Q9Y238 1755 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SLC35F4A4IF30 521 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SNAP23O00161 211 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
EPHA4-213ENST00000495693 PRKAB2O43741 272 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 RANBP6O60518 1105 aaKnown RBP9.89□□□□□ -0.83
EPHA4-213ENST00000495693 CUTAO60888 179 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 UFL1O94874 794 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 MMP1P03956 469 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 LIG1P18858 919 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 KCNQ4P56696 695 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 NCOA4Q13772 614 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SLC39A14Q15043 492 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SEC23AQ15436 765 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 CTR9Q6PD62 1173 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SP8Q8IXZ3 490 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 CEP57L1Q8IYX8 460 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 FSIP1Q8NA03 581 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 SDR42E1Q8WUS8 393 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 PGBD1Q96JS3 809 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
EPHA4-213ENST00000495693 EYA3Q99504 573 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 LZTS2Q9BRK4 669 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 COA1Q9GZY4 146 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 ZMYND15Q9H091 742 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 TCP11L1Q9NUJ3 509 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
EPHA4-213ENST00000495693 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
EPHA4-213ENST00000495693 PCDHGA11Q9Y5H2 935 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 LRRC37AA6NMS7 1700 aa9.89□□□□□ -0.83
EPHA4-213ENST00000495693 MROH7-TTC4A0A0A0MT08 1334 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 USP17L3A6NCW0 530 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 USP17L4A6NCW7 530 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 USP17L12C9JPN9 530 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms