RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PEAK1Q9H792 1746 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 FBRSQ9HAH7 460 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 BRMS1Q9HCU9 246 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 STK32BQ9NY57 414 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 KIAA1210Q9ULL0 1709 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 BCL9O00512 1426 aa9□□□□□ -0.97
VIM-207ENST00000495528 CPSF1Q10570 1443 aaKnown RBP9□□□□□ -0.97
VIM-207ENST00000495528 PGRP06401 933 aa9□□□□□ -0.97
VIM-207ENST00000495528 FSTP19883 344 aa9□□□□□ -0.97
VIM-207ENST00000495528 TNNI2P48788 182 aa9□□□□□ -0.97
VIM-207ENST00000495528 CDK5R2Q13319 367 aa9□□□□□ -0.97
VIM-207ENST00000495528 SLC15A2Q16348 729 aa9□□□□□ -0.97
VIM-207ENST00000495528 NKD1Q969G9 470 aa9□□□□□ -0.97
VIM-207ENST00000495528 TBC1D32Q96NH3 1257 aa9□□□□□ -0.97
VIM-207ENST00000495528 SIN3AQ96ST3 1273 aa9□□□□□ -0.97
VIM-207ENST00000495528 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
VIM-207ENST00000495528 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
VIM-207ENST00000495528 POLR3KQ9Y2Y1 108 aaPredicted RBP9□□□□□ -0.97
VIM-207ENST00000495528 COL18A1P39060 1754 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 LRRC37A3O60309 1634 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 PLCG1P19174 1290 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 SHISA5Q8N114 240 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 TTC21AQ8NDW8 1320 aa8.99□□□□□ -0.97
VIM-207ENST00000495528 ADMP35318 185 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 PDE4BQ07343 736 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 NFIAQ12857 509 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 NKG7Q16617 165 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 RNF43Q68DV7 783 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 GK5Q6ZS86 529 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 INPP5FQ9Y2H2 1132 aa8.98□□□□□ -0.97
VIM-207ENST00000495528 PIK3C2AO00443 1686 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 PRSS36Q5K4E3 855 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 SEZ6L2Q6UXD5 910 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 HID1Q8IV36 788 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
VIM-207ENST00000495528 DPH2Q9BQC3 489 aaPredicted RBP8.97□□□□□ -0.97
VIM-207ENST00000495528 LRRC3Q9BY71 257 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 PCDHB14Q9Y5E9 798 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 QRICH2Q9H0J4 1663 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 KTN1Q86UP2 1357 aaKnown RBP8.97□□□□□ -0.97
VIM-207ENST00000495528 CCDC7Q96M83 1385 aa8.97□□□□□ -0.97
VIM-207ENST00000495528 SBF2Q86WG5 1849 aa8.96□□□□□ -0.97
VIM-207ENST00000495528 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.98
VIM-207ENST00000495528 HTR3BO95264 441 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 NME9Q86XW9 330 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 KCT2Q8NC54 265 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 XAGE3Q8WTP9 111 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 CAPN10Q9HC96 672 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 TJP2Q9UDY2 1190 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 TACC3Q9Y6A5 838 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 ROCK2O75116 1388 aaKnown RBP8.96□□□□□ -0.98
VIM-207ENST00000495528 CASZ1Q86V15 1759 aa8.96□□□□□ -0.98
VIM-207ENST00000495528 RGPD3A6NKT7 1758 aaPredicted RBP8.95□□□□□ -0.98
VIM-207ENST00000495528 RGPD4Q7Z3J3 1758 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 WDR64B1ANS9 1081 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 IL2RBP14784 551 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 CLCQ05315 142 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 SLBPQ14493 270 aaKnown RBP eCLIP8.95□□□□□ -0.98
VIM-207ENST00000495528 ARMCX6Q7L4S7 300 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 SHKBP1Q8TBC3 707 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 ACSF2Q96CM8 615 aaPredicted RBP8.95□□□□□ -0.98
VIM-207ENST00000495528 GPRASP2Q96D09 838 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 DBNDD2Q9BQY9 259 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 REV1Q9UBZ9 1251 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 KLHL3Q9UH77 587 aa8.95□□□□□ -0.98
VIM-207ENST00000495528 FAM170BA6NMN3 283 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 UPK3BL1B0FP48 263 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 UPK3BL2E5RIL1 263 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 LEFTY1O75610 366 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 F13BP05160 661 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 FAM87AP0C7U9 286 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 ZNF827Q17R98 1081 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 PRAMEF13Q5VWM6 474 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 ZAR1Q86SH2 424 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 SLITRK4Q8IW52 837 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 TMEM87BQ96K49 555 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 SLC12A5Q9H2X9 1139 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 NFAT5O94916 1531 aa8.94□□□□□ -0.98
VIM-207ENST00000495528 GSC2O15499 205 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 ZNF165P49910 485 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 FAM13CQ8NE31 585 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 GATA6Q92908 595 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 FOXQ1Q9C009 403 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 GINM1Q9NU53 330 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 EFR3BQ9Y2G0 817 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 SBNO2Q9Y2G9 1366 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 TRPM1Q7Z4N2 1603 aa8.93□□□□□ -0.98
VIM-207ENST00000495528 RGPD5Q99666 1765 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 MYOM1P52179 1685 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 LRIG2O94898 1065 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 ITGB7P26010 798 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 ZNF765Q7L2R6 523 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms