RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 BIN2Q9UBW5 565 aaPredicted RBP20.03■□□□□ 0.8
SNX17-209ENST00000494893 MAD2L2Q9UI95 211 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 SNX14Q9Y5W7 946 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 REC8O95072 547 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 PGK2P07205 417 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 FCER1AP12319 257 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 CCL5P13501 91 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
SNX17-209ENST00000494893 ASPRV1Q53RT3 343 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 MMP19Q99542 508 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 USP26Q9BXU7 913 aa20.02■□□□□ 0.8
SNX17-209ENST00000494893 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
SNX17-209ENST00000494893 PALM3A6NDB9 673 aaPredicted RBP20.01■□□□□ 0.79
SNX17-209ENST00000494893 PARP1P09874 1014 aaKnown RBP20.01■□□□□ 0.79
SNX17-209ENST00000494893 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
SNX17-209ENST00000494893 UBXN2AP68543 259 aa20.01■□□□□ 0.79
SNX17-209ENST00000494893 GRM4Q14833 912 aa20.01■□□□□ 0.79
SNX17-209ENST00000494893 SART3Q15020 963 aaKnown RBP20.01■□□□□ 0.79
SNX17-209ENST00000494893 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
SNX17-209ENST00000494893 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
SNX17-209ENST00000494893 RBBP6Q7Z6E9 1792 aaKnown RBP20■□□□□ 0.79
SNX17-209ENST00000494893 DNAJC25-GNG10A0A024R161 153 aa20■□□□□ 0.79
SNX17-209ENST00000494893 ERICH2A1L162 156 aa20■□□□□ 0.79
SNX17-209ENST00000494893 ICAM1P05362 532 aa20■□□□□ 0.79
SNX17-209ENST00000494893 CPA1P15085 419 aa20■□□□□ 0.79
SNX17-209ENST00000494893 RGS19P49795 217 aa20■□□□□ 0.79
SNX17-209ENST00000494893 CACNB2Q08289 660 aaPredicted RBP20■□□□□ 0.79
SNX17-209ENST00000494893 ZNF792Q3KQV3 632 aa20■□□□□ 0.79
SNX17-209ENST00000494893 MUM1L1Q5H9M0 696 aa20■□□□□ 0.79
SNX17-209ENST00000494893 DPP9Q86TI2 863 aa20■□□□□ 0.79
SNX17-209ENST00000494893 ADGRF4Q8IZF3 695 aa20■□□□□ 0.79
SNX17-209ENST00000494893 CHST13Q8NET6 341 aa20■□□□□ 0.79
SNX17-209ENST00000494893 TMEM87BQ96K49 555 aa20■□□□□ 0.79
SNX17-209ENST00000494893 FGD4Q96M96 766 aa20■□□□□ 0.79
SNX17-209ENST00000494893 MYL10Q9BUA6 226 aa20■□□□□ 0.79
SNX17-209ENST00000494893 JMJD4Q9H9V9 463 aa20■□□□□ 0.79
SNX17-209ENST00000494893 RNF146Q9NTX7 359 aa20■□□□□ 0.79
SNX17-209ENST00000494893 EPB41L2O43491 1005 aaKnown RBP19.99■□□□□ 0.79
SNX17-209ENST00000494893 ALAS1P13196 640 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 EN2P19622 333 aaPredicted RBP19.99■□□□□ 0.79
SNX17-209ENST00000494893 KCTD2Q14681 263 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 TRMT44Q8IYL2 757 aaKnown RBP19.99■□□□□ 0.79
SNX17-209ENST00000494893 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 SHISA4Q96DD7 197 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 TRERF1Q96PN7 1200 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 RNF208Q9H0X6 261 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 PAK6Q9NQU5 681 aaPredicted RBP19.99■□□□□ 0.79
SNX17-209ENST00000494893 CCPG1Q9ULG6 757 aa19.99■□□□□ 0.79
SNX17-209ENST00000494893 KLRF2D3W0D1 207 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 PRKAR2AP13861 404 aaKnown RBP19.98■□□□□ 0.79
SNX17-209ENST00000494893 CYP2C19P33261 490 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 LIFRP42702 1097 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 KRT32Q14532 448 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 TKFCQ3LXA3 575 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 OLFML2BQ68BL8 750 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 DHX32Q7L7V1 743 aaKnown RBP19.98■□□□□ 0.79
SNX17-209ENST00000494893 TRPV1Q8NER1 839 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 ACAD9Q9H845 621 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 A1CFQ9NQ94 594 aaKnown RBP19.98■□□□□ 0.79
SNX17-209ENST00000494893 FBXO40Q9UH90 709 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 WDR19Q8NEZ3 1342 aa19.98■□□□□ 0.79
SNX17-209ENST00000494893 CYTH3O43739 400 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 GJB1P08034 283 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 CDC37Q16543 378 aaPredicted RBP19.97■□□□□ 0.79
SNX17-209ENST00000494893 SGMS1Q86VZ5 419 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 CLEC4DQ8WXI8 215 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 MTMR8Q96EF0 704 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
SNX17-209ENST00000494893 TMEM106CQ9BVX2 250 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNX17-209ENST00000494893 SMCHD1A6NHR9 2005 aa19.97■□□□□ 0.79
SNX17-209ENST00000494893 NFIBO00712 420 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
SNX17-209ENST00000494893 SEC24BO95487 1268 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 CCND3P30281 292 aaPredicted RBP19.96■□□□□ 0.79
SNX17-209ENST00000494893 QRICH1Q2TAL8 776 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 CATIPQ7Z7H3 387 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 RAB11FIP4Q86YS3 637 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 VAT1LQ9HCJ6 419 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 DIS3Q9Y2L1 958 aaKnown RBP19.96■□□□□ 0.79
SNX17-209ENST00000494893 RPTORQ8N122 1335 aa19.96■□□□□ 0.79
SNX17-209ENST00000494893 PPP1R11O60927 126 aaPredicted RBP19.95■□□□□ 0.78
SNX17-209ENST00000494893 DDAH1O94760 285 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 RXRAP19793 462 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 CNTN2Q02246 1040 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 ANKRD35Q8N283 1001 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 FAM133AQ8N9E0 248 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 NUP133Q8WUM0 1156 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 DDX11Q96FC9 970 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 DEFB118Q96PH6 123 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 RIOX1Q9H6W3 641 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 ZNFX1Q9P2E3 1918 aaKnown RBP19.95■□□□□ 0.78
SNX17-209ENST00000494893 ASTN1O14525 1302 aa19.95■□□□□ 0.78
SNX17-209ENST00000494893 KIAA0100Q14667 2235 aaKnown RBP19.95■□□□□ 0.78
SNX17-209ENST00000494893 CYBAP13498 195 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms