RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ELNP15502 786 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 MAPK4P31152 587 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
APTX-230ENST00000494649 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
APTX-230ENST00000494649 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.34
APTX-230ENST00000494649 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
APTX-230ENST00000494649 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 CYTH3O43739 400 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 DDAH1O94760 285 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 STK3Q13188 491 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
APTX-230ENST00000494649 BTNL9Q6UXG8 535 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
APTX-230ENST00000494649 JMJD4Q9H9V9 463 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 ZBTB43O43298 467 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 CCT2P78371 535 aaKnown RBP12.95□□□□□ -0.34
APTX-230ENST00000494649 CCL14Q16627 93 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 SGMS1Q86VZ5 419 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 PIGSQ96S52 555 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
APTX-230ENST00000494649 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 PLA2G6O60733 806 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 HOXD10P28358 340 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 ADORA2AP29274 412 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 NEK4P51957 841 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
APTX-230ENST00000494649 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
APTX-230ENST00000494649 RNF146Q9NTX7 359 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
APTX-230ENST00000494649 PTPREP23469 700 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 CDC27P30260 824 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 MMP19Q99542 508 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 NFIBO00712 420 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 PPP1R11O60927 126 aaPredicted RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 SLC25A27O95847 323 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 ICAM1P05362 532 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 FCER1AP12319 257 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 KIF5BP33176 963 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
APTX-230ENST00000494649 ANAPC15P60006 121 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 TRIM32Q13049 653 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 RTN1Q16799 776 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 PURBQ96QR8 312 aaKnown RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 TM6SF1Q9BZW5 370 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 MROH8Q9H579 483 aa12.93□□□□□ -0.34
APTX-230ENST00000494649 UPF2Q9HAU5 1272 aaKnown RBP12.93□□□□□ -0.34
APTX-230ENST00000494649 ADCY3O60266 1144 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 COBLO75128 1261 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 AK2P54819 239 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 KCTD2Q14681 263 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 MORN1Q5T089 497 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 KIF2CQ99661 725 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
APTX-230ENST00000494649 CALM1P0DP23 149 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 CALM2P0DP24 149 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 CALM3P0DP25 149 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 OAZ1P54368 228 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 GRB14Q14449 540 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 TRIB2Q92519 343 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 DDX11Q96FC9 970 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 FAM217BQ9NTX9 383 aaPredicted RBP12.92□□□□□ -0.34
APTX-230ENST00000494649 FLRT1Q9NZU1 646 aa12.92□□□□□ -0.34
APTX-230ENST00000494649 GNRH1P01148 92 aa12.91□□□□□ -0.34
APTX-230ENST00000494649 PDIA3P30101 505 aaKnown RBP12.91□□□□□ -0.34
APTX-230ENST00000494649 GRK4P32298 578 aa12.91□□□□□ -0.34
APTX-230ENST00000494649 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
APTX-230ENST00000494649 SOCS4Q8WXH5 440 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms