RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 ZNF236Q9UL36 1845 aa25.69■■□□□ 1.7
HPS3-207ENST00000494327 SNHG28P0DPA3 235 aa25.68■■□□□ 1.7
HPS3-207ENST00000494327 CAPN2P17655 700 aa25.68■■□□□ 1.7
HPS3-207ENST00000494327 IFIT1BQ5T764 474 aaKnown RBP25.68■■□□□ 1.7
HPS3-207ENST00000494327 TRPV1Q8NER1 839 aa25.68■■□□□ 1.7
HPS3-207ENST00000494327 ANO2Q9NQ90 1003 aa25.68■■□□□ 1.7
HPS3-207ENST00000494327 RNF146Q9NTX7 359 aa25.68■■□□□ 1.7
HPS3-207ENST00000494327 IGHA2P01877 340 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 CYBAP13498 195 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 LHX8Q68G74 356 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 CASC1Q6TDU7 716 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 UBE2Q1Q7Z7E8 422 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 NCOA7Q8NI08 942 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 DIS3LQ8TF46 1054 aaKnown RBP25.67■■□□□ 1.7
HPS3-207ENST00000494327 PAWRQ96IZ0 340 aaKnown RBP25.67■■□□□ 1.7
HPS3-207ENST00000494327 TRERF1Q96PN7 1200 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 RANBP17Q9H2T7 1088 aaKnown RBP25.67■■□□□ 1.7
HPS3-207ENST00000494327 ACAD9Q9H845 621 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 OGDHLQ9ULD0 1010 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 CCPG1Q9ULG6 757 aa25.67■■□□□ 1.7
HPS3-207ENST00000494327 DIS3Q9Y2L1 958 aaKnown RBP25.67■■□□□ 1.7
HPS3-207ENST00000494327 TAL1P17542 331 aaPredicted RBP25.66■■□□□ 1.7
HPS3-207ENST00000494327 TKFCQ3LXA3 575 aa25.66■■□□□ 1.7
HPS3-207ENST00000494327 GPATCH4Q5T3I0 446 aaKnown RBP25.66■■□□□ 1.7
HPS3-207ENST00000494327 STOX1Q6ZVD7 989 aa25.66■■□□□ 1.7
HPS3-207ENST00000494327 DPF3Q92784 378 aa25.66■■□□□ 1.7
HPS3-207ENST00000494327 TINF2Q9BSI4 451 aa25.66■■□□□ 1.7
HPS3-207ENST00000494327 UBA5Q9GZZ9 404 aa25.66■■□□□ 1.7
HPS3-207ENST00000494327 DDX20Q9UHI6 824 aaKnown RBP25.66■■□□□ 1.7
HPS3-207ENST00000494327 CHST3Q7LGC8 479 aa25.65■■□□□ 1.7
HPS3-207ENST00000494327 ANKLE1Q8NAG6 615 aa25.65■■□□□ 1.7
HPS3-207ENST00000494327 CPVLQ9H3G5 476 aa25.65■■□□□ 1.7
HPS3-207ENST00000494327 DNAJC25-GNG10A0A024R161 153 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 IFIT3O14879 490 aaKnown RBP25.64■■□□□ 1.7
HPS3-207ENST00000494327 CDC45O75419 566 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 ICAM1P05362 532 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 SEC23AQ15436 765 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 ANO1Q5XXA6 986 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 NECAB2Q7Z6G3 386 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 HTATIP2Q9BUP3 242 aa25.64■■□□□ 1.7
HPS3-207ENST00000494327 ERICH2A1L162 156 aa25.63■■□□□ 1.69
HPS3-207ENST00000494327 MUM1L1Q5H9M0 696 aa25.63■■□□□ 1.69
HPS3-207ENST00000494327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.63■■□□□ 1.69
HPS3-207ENST00000494327 POTEB2H3BUK9 544 aa25.62■■□□□ 1.69
HPS3-207ENST00000494327 SLC27A2O14975 620 aa25.62■■□□□ 1.69
HPS3-207ENST00000494327 MSCO60682 206 aa25.62■■□□□ 1.69
HPS3-207ENST00000494327 PARP1P09874 1014 aaKnown RBP25.62■■□□□ 1.69
HPS3-207ENST00000494327 PRPF38BQ5VTL8 546 aaKnown RBP25.62■■□□□ 1.69
HPS3-207ENST00000494327 A1CFQ9NQ94 594 aaKnown RBP25.62■■□□□ 1.69
HPS3-207ENST00000494327 PPP4R2Q9NY27 417 aa25.62■■□□□ 1.69
HPS3-207ENST00000494327 ZNFX1Q9P2E3 1918 aaKnown RBP25.62■■□□□ 1.69
HPS3-207ENST00000494327 SEPT4O43236 478 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 MNX1P50219 401 aaPredicted RBP25.61■■□□□ 1.69
HPS3-207ENST00000494327 CNTN2Q02246 1040 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 SART3Q15020 963 aaKnown RBP25.61■■□□□ 1.69
HPS3-207ENST00000494327 ASPRV1Q53RT3 343 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 CREB3L3Q68CJ9 461 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 NSMFQ6X4W1 530 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 CNPY2Q9Y2B0 182 aa25.61■■□□□ 1.69
HPS3-207ENST00000494327 MKI67P46013 3256 aaKnown RBP25.6■■□□□ 1.69
HPS3-207ENST00000494327 DHX16O60231 1041 aaKnown RBP25.6■■□□□ 1.69
HPS3-207ENST00000494327 WTAPQ15007 396 aa25.6■■□□□ 1.69
HPS3-207ENST00000494327 NECTIN1Q15223 517 aa25.6■■□□□ 1.69
HPS3-207ENST00000494327 C11orf49Q9H6J7 331 aa25.6■■□□□ 1.69
HPS3-207ENST00000494327 VAT1LQ9HCJ6 419 aa25.6■■□□□ 1.69
HPS3-207ENST00000494327 MYCNP04198 464 aaPredicted RBP25.59■■□□□ 1.69
HPS3-207ENST00000494327 TMEM67Q5HYA8 995 aa25.59■■□□□ 1.69
HPS3-207ENST00000494327 MB21D2Q8IYB1 491 aaPredicted RBP25.59■■□□□ 1.69
HPS3-207ENST00000494327 SENP2Q9HC62 589 aa25.59■■□□□ 1.69
HPS3-207ENST00000494327 ANTXR2P58335 489 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 MAMDC4Q6UXC1 1216 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 ZNF467Q7Z7K2 595 aaPredicted RBP25.58■■□□□ 1.69
HPS3-207ENST00000494327 ADGRF4Q8IZF3 695 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 STAG2Q8N3U4 1231 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 MSL3Q8N5Y2 521 aaKnown RBP25.58■■□□□ 1.69
HPS3-207ENST00000494327 FGD4Q96M96 766 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 NRBP1Q9UHY1 535 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 ZHX1Q9UKY1 873 aaPredicted RBP25.58■■□□□ 1.69
HPS3-207ENST00000494327 PFASO15067 1338 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 SYNGAP1Q96PV0 1343 aa25.58■■□□□ 1.69
HPS3-207ENST00000494327 SNAI1O95863 264 aaPredicted RBP25.57■■□□□ 1.68
HPS3-207ENST00000494327 CDC37Q16543 378 aaPredicted RBP25.57■■□□□ 1.68
HPS3-207ENST00000494327 USH1GQ495M9 461 aa25.57■■□□□ 1.68
HPS3-207ENST00000494327 ERICH6BQ5W0A0 696 aa25.57■■□□□ 1.68
HPS3-207ENST00000494327 FAM133AQ8N9E0 248 aa25.57■■□□□ 1.68
HPS3-207ENST00000494327 CYP39A1Q9NYL5 469 aa25.57■■□□□ 1.68
HPS3-207ENST00000494327 PNMA2Q9UL42 364 aa25.57■■□□□ 1.68
HPS3-207ENST00000494327 NFIBO00712 420 aa25.56■■□□□ 1.68
HPS3-207ENST00000494327 ZNF865P0CJ78 1059 aaPredicted RBP25.56■■□□□ 1.68
HPS3-207ENST00000494327 BAATQ14032 418 aaPredicted RBP25.56■■□□□ 1.68
HPS3-207ENST00000494327 CCDC144CPQ8IYA2 1237 aa25.56■■□□□ 1.68
HPS3-207ENST00000494327 IGDCC4Q8TDY8 1250 aa25.56■■□□□ 1.68
HPS3-207ENST00000494327 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.56■■□□□ 1.68
HPS3-207ENST00000494327 PLXNA1Q9UIW2 1896 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 PTPDC1A2A3K4 754 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 SOWAHBA6NEL2 793 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 KLRF2D3W0D1 207 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 PRC1O43663 620 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 EVI5O60447 810 aa25.55■■□□□ 1.68
HPS3-207ENST00000494327 GJC2Q5T442 439 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms