RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.57
UFD1-210ENST00000494054 BMP8BP34820 402 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 RTP1P59025 263 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 CNTN2Q02246 1040 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
UFD1-210ENST00000494054 DCAF4Q8WV16 495 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 IL25Q9H293 177 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 FBXO40Q9UH90 709 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
UFD1-210ENST00000494054 RARBP10826 455 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 ALAS1P13196 640 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 SLC16A2P36021 539 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 MFAP1P55081 439 aaKnown RBP11.51□□□□□ -0.57
UFD1-210ENST00000494054 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
UFD1-210ENST00000494054 FAM133AQ8N9E0 248 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
UFD1-210ENST00000494054 RNF146Q9NTX7 359 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
UFD1-210ENST00000494054 ATP11BQ9Y2G3 1177 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 NEDD4P46934 1319 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 FRMPD2Q68DX3 1309 aaPredicted RBP11.51□□□□□ -0.57
UFD1-210ENST00000494054 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
UFD1-210ENST00000494054 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 ZNF213O14771 459 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 ADCY6O43306 1168 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 ADAMTS4O75173 837 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 AKR1A1P14550 325 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 GSPT1P15170 499 aaKnown RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 SNX17Q15036 470 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 KATNBL1Q9H079 304 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 ZHX1Q9UKY1 873 aaPredicted RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 FAM184BQ9ULE4 1060 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
UFD1-210ENST00000494054 DDX49Q9Y6V7 483 aaKnown RBP11.5□□□□□ -0.57
UFD1-210ENST00000494054 HIP1O00291 1037 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 PDHBP11177 359 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 PCP11498 1178 aaKnown RBP11.49□□□□□ -0.57
UFD1-210ENST00000494054 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 TTC22Q5TAA0 569 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 ARMCX2Q7L311 632 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 RNF180Q86T96 592 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 KLHDC9Q8NEP7 349 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 TTC14Q96N46 770 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
UFD1-210ENST00000494054 DSCC1Q9BVC3 393 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 UBE2OQ9C0C9 1292 aaKnown RBP11.49□□□□□ -0.57
UFD1-210ENST00000494054 CCPG1Q9ULG6 757 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 ASTN1O14525 1302 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 SYNRGQ9UMZ2 1314 aa11.49□□□□□ -0.57
UFD1-210ENST00000494054 MYADML2A6NDP7 307 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 KDM4AO75164 1064 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 ICAM1P05362 532 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 SNHG28P0DPA3 235 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 TLE2Q04725 743 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 ZNF543Q08ER8 600 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 CCDC144BQ3MJ40 725 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 C1orf53Q5VUE5 145 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 CCSAPQ6IQ19 270 aaPredicted RBP11.48□□□□□ -0.57
UFD1-210ENST00000494054 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 ESR2Q92731 530 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 ABHD16BQ9H3Z7 469 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 CYP39A1Q9NYL5 469 aa11.48□□□□□ -0.57
UFD1-210ENST00000494054 SZT2Q5T011 3432 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 MCM3APO60318 1980 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.47□□□□□ -0.57
UFD1-210ENST00000494054 A0A1W2PQ45 241 aaPredicted RBP11.47□□□□□ -0.57
UFD1-210ENST00000494054 A0A1W2PQY0 241 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 B4E1Z4 1266 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 DUSP11O75319 330 aaKnown RBP11.47□□□□□ -0.57
UFD1-210ENST00000494054 GOLGA8HP0CJ92 632 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 PTGS1P23219 599 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 ACLYP53396 1101 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 KCNA10Q16322 511 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 NSMFQ6X4W1 530 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms