RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 KRT28Q7Z3Y7 464 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 NDNQ99608 321 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 FBXO9Q9UK97 447 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 CHMP2BQ9UQN3 213 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 CYP27B1O15528 508 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 LDHAP00338 332 aaKnown RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 A1BGP04217 495 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 MAP3K12Q12852 859 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 STK3Q13188 491 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 BRINP3Q76B58 766 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 TRIM50Q86XT4 487 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 SLC35F6Q8N357 371 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 MYCBPAPQ8TBZ2 947 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 ZWILCHQ9H900 591 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 STK38LQ9Y2H1 464 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 BACH1O14867 736 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 ATP1A3P13637 1013 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 AMPHP49418 695 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 IGBP1P78318 339 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 ELF3P78545 371 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-205ENST00000493587 NNTQ13423 1086 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 P3H1Q32P28 736 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 TMEM154Q6P9G4 183 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 BICDL1Q6ZP65 573 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 ZFAND2BQ8WV99 257 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 LRRC59Q96AG4 307 aaKnown RBP7.6□□□□□ -1.19
VPS13B-205ENST00000493587 GBP5Q96PP8 586 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 PCMTD2Q9NV79 361 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 CWC25Q9NXE8 425 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-205ENST00000493587 DLGAP2Q9P1A6 1054 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 ATXN10Q9UBB4 475 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 WDR37Q9Y2I8 494 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 F8VZ95 297 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 PPP1R37O75864 691 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 LARGE1O95461 756 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 SLC4A8Q2Y0W8 1093 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-205ENST00000493587 RUFY3Q7L099 469 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 C14orf80Q86SX3 495 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 KCNH5Q8NCM2 988 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 AGAP11Q8TF27 550 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 DDX12PQ92771 950 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 FAM163AQ96GL9 167 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-205ENST00000493587 SPATA17Q96L03 361 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 CORO1BQ9BR76 489 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 MTA3Q9BTC8 594 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 EBF2Q9HAK2 575 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 CFAP45Q9UL16 551 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 SPATA31A3Q5VYP0 1347 aa7.6□□□□□ -1.19
VPS13B-205ENST00000493587 DNM1LO00429 736 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 FLOT1O75955 427 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 EIF4A1P60842 406 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 TUBB2AQ13885 445 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 DPCR1Q3MIW9 517 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SLC44A4Q53GD3 710 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 ANKRD20A8PQ5CZ79 823 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SH2D4BQ5SQS7 431 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 APBB1IPQ7Z5R6 666 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 TTC30AQ86WT1 665 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 PGBD1Q96JS3 809 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 TUBB2BQ9BVA1 445 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 WDR35Q9P2L0 1181 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 ATP8A1Q9Y2Q0 1164 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 CDK5RAP2Q96SN8 1893 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 LIN7AO14910 233 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 MATR3P43243 847 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SEPT7Q16181 437 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 PTGISQ16647 500 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 RBM43Q6ZSC3 357 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 MAATS1Q7Z4T9 603 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 CNBD1Q8NA66 436 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 ARL8AQ96BM9 186 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 CYFIP2Q96F07 1278 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 NAF1Q96HR8 494 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 ZSCAN31Q96LW9 406 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SNRKQ9NRH2 765 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 NHSQ6T4R5 1651 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 LRRC10BA6NIK2 292 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 MYCLP1P12525 358 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 MLH1P40692 756 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 MRPS35P82673 323 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 LACTBP83111 547 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 RCN1Q15293 331 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 NAA16Q6N069 864 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 FBF1Q8TES7 1133 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SPIRE2Q8WWL2 714 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
VPS13B-205ENST00000493587 SLX1AQ9BQ83 275 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 LNPEPQ9UIQ6 1025 aa7.59□□□□□ -1.19
VPS13B-205ENST00000493587 P4HA2O15460 535 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 NR1D1P20393 614 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 STAT6P42226 847 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 GNAQP50148 359 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 USP46P62068 366 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms