RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ABRAQ8N0Z2 381 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 USP6NLQ92738 828 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 ZNF333Q96JL9 665 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 AGBL1Q96MI9 1066 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 MMP19Q99542 508 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 UBA5Q9GZZ9 404 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 HOMER2Q9NSB8 354 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 LCTP09848 1927 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 ZNF536O15090 1300 aa14.92□□□□□ -0.02
CLIP2-209ENST00000493166 DHX16O60231 1041 aaKnown RBP14.91□□□□□ -0.02
CLIP2-209ENST00000493166 MYCP01106 439 aaPredicted RBP14.91□□□□□ -0.02
CLIP2-209ENST00000493166 LIFRP42702 1097 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 UBXN2AP68543 259 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 KCTD2Q14681 263 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 GRM4Q14833 912 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
CLIP2-209ENST00000493166 ZNF654Q8IZM8 581 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 NUP133Q8WUM0 1156 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 TCEANC2Q96MN5 208 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 FBXO40Q9UH90 709 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 CCPG1Q9ULG6 757 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
CLIP2-209ENST00000493166 KLRF2D3W0D1 207 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 DDAH1O94760 285 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 HMGCRP04035 888 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 INHAP05111 366 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 ICAM1P05362 532 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 ALAS1P13196 640 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 PSMA5P28066 241 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 FGD1P98174 961 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 EXOSC10Q01780 885 aaKnown RBP14.9□□□□□ -0.02
CLIP2-209ENST00000493166 TROAPQ12815 778 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 ADGRF4Q8IZF3 695 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 STAG2Q8N3U4 1231 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 CHST13Q8NET6 341 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 TRIB2Q92519 343 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 MYL10Q9BUA6 226 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 RNF146Q9NTX7 359 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 PNMA2Q9UL42 364 aa14.9□□□□□ -0.02
CLIP2-209ENST00000493166 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-209ENST00000493166 HOXC6P09630 235 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 CPA1P15085 419 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
CLIP2-209ENST00000493166 CDC37Q16543 378 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-209ENST00000493166 CCL14Q16627 93 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 SGMS1Q86VZ5 419 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 ANKRD35Q8N283 1001 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 CTCFLQ8NI51 663 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-209ENST00000493166 NPLOC4Q8TAT6 608 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 ACAD9Q9H845 621 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
CLIP2-209ENST00000493166 KIAA0100Q14667 2235 aaKnown RBP14.89□□□□□ -0.03
CLIP2-209ENST00000493166 COBLO75128 1261 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 PGK2P07205 417 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 CALM1P0DP23 149 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 CALM2P0DP24 149 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 CALM3P0DP25 149 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 TAL1P17542 331 aaPredicted RBP14.88□□□□□ -0.03
CLIP2-209ENST00000493166 KIF5BP33176 963 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 SOX10P56693 466 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 SYNE3Q6ZMZ3 975 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLIP2-209ENST00000493166 DDX11Q96FC9 970 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 MAP3K14Q99558 947 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 VAT1LQ9HCJ6 419 aa14.88□□□□□ -0.03
CLIP2-209ENST00000493166 CCL5P13501 91 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 RXRAP19793 462 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 MTFR1Q15390 333 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 USH1GQ495M9 461 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 MUM1L1Q5H9M0 696 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 MFSD14CQ5VZR4 134 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 Q6ZUG5 572 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 JMJD4Q9H9V9 463 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 PFASO15067 1338 aa14.87□□□□□ -0.03
CLIP2-209ENST00000493166 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
CLIP2-209ENST00000493166 GNAQP50148 359 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 TRIM32Q13049 653 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 C8orf34Q49A92 452 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 OLFML2BQ68BL8 750 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 APOA5Q6Q788 366 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 CCDC144CPQ8IYA2 1237 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 RNF208Q9H0X6 261 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
CLIP2-209ENST00000493166 A1CFQ9NQ94 594 aaKnown RBP14.86□□□□□ -0.03
CLIP2-209ENST00000493166 NAP1L2Q9ULW6 460 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms