RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 MYCNP04198 464 aaPredicted RBP21.23■□□□□ 0.99
PTPRU-207ENST00000492954 ZNF865P0CJ78 1059 aaPredicted RBP21.23■□□□□ 0.99
PTPRU-207ENST00000492954 SYN1P17600 705 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 SLC16A2P36021 539 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 FXR1P51114 621 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTPRU-207ENST00000492954 MSL3Q8N5Y2 521 aaKnown RBP21.23■□□□□ 0.99
PTPRU-207ENST00000492954 ARRDC4Q8NCT1 418 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 FGD4Q96M96 766 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 ZKSCAN3Q9BRR0 538 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 ACAD9Q9H845 621 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 RNF146Q9NTX7 359 aa21.23■□□□□ 0.99
PTPRU-207ENST00000492954 FRMPD2Q68DX3 1309 aaPredicted RBP21.23■□□□□ 0.99
PTPRU-207ENST00000492954 PLXNA1Q9UIW2 1896 aa21.22■□□□□ 0.99
PTPRU-207ENST00000492954 ALAS1P13196 640 aa21.22■□□□□ 0.99
PTPRU-207ENST00000492954 MAMDC4Q6UXC1 1216 aa21.22■□□□□ 0.99
PTPRU-207ENST00000492954 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
PTPRU-207ENST00000492954 SYNGAP1Q96PV0 1343 aa21.22■□□□□ 0.99
PTPRU-207ENST00000492954 KBTBD13C9JR72 458 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 SNAI1O95863 264 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 PDHBP11177 359 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 LRRC41Q15345 812 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 IMMTQ16891 758 aaKnown RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 TKFCQ3LXA3 575 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 SYDE2Q5VT97 1194 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 BTNL9Q6UXG8 535 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 ZNF467Q7Z7K2 595 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 LENG1Q96BZ8 264 aaPredicted RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 TTC14Q96N46 770 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 GPCPD1Q9NPB8 672 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 A1CFQ9NQ94 594 aaKnown RBP21.21■□□□□ 0.99
PTPRU-207ENST00000492954 PCDH10Q9P2E7 1040 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 CTNNA3Q9UI47 895 aa21.21■□□□□ 0.99
PTPRU-207ENST00000492954 LAMA4Q16363 1823 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 B4E1Z4 1266 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 KDM4AO75164 1064 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 RARBP10826 455 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 TRERF1Q96PN7 1200 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 RANBP17Q9H2T7 1088 aaKnown RBP21.2■□□□□ 0.98
PTPRU-207ENST00000492954 XPNPEP3Q9NQH7 507 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 CCPG1Q9ULG6 757 aa21.2■□□□□ 0.98
PTPRU-207ENST00000492954 PGK1P00558 417 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 AKR1A1P14550 325 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 CNTN2Q02246 1040 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 ZNF543Q08ER8 600 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 MUM1L1Q5H9M0 696 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.19■□□□□ 0.98
PTPRU-207ENST00000492954 ZHX1Q9UKY1 873 aaPredicted RBP21.19■□□□□ 0.98
PTPRU-207ENST00000492954 RAD50Q92878 1312 aa21.19■□□□□ 0.98
PTPRU-207ENST00000492954 LAMA3Q16787 3333 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 POTEB2H3BUK9 544 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 ICAM1P05362 532 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 SNHG28P0DPA3 235 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 CHMLP26374 656 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 IQCA1Q86XH1 822 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 FAM133AQ8N9E0 248 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 GDF15Q99988 308 aa21.18■□□□□ 0.98
PTPRU-207ENST00000492954 ADCYAP1R1P41586 468 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 NT5C2P49902 561 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 ACVR2BQ13705 512 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 ARMCX2Q7L311 632 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 RUFY2Q8WXA3 655 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 FERMT2Q96AC1 680 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 ZSWIM5Q9P217 1185 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 FAM184BQ9ULE4 1060 aa21.17■□□□□ 0.98
PTPRU-207ENST00000492954 SMCHD1A6NHR9 2005 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 SOWAHBA6NEL2 793 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 MAGEA10P43363 369 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-207ENST00000492954 RTP1P59025 263 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 CCDC178Q5BJE1 867 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 CCDC144CPQ8IYA2 1237 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 PNMA1Q8ND90 353 aa21.16■□□□□ 0.98
PTPRU-207ENST00000492954 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-207ENST00000492954 GOLGA8HP0CJ92 632 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 PTH1RQ03431 593 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 NSMFQ6X4W1 530 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 SLC39A5Q6ZMH5 540 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 RNF180Q86T96 592 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 ENAHQ8N8S7 591 aaPredicted RBP21.15■□□□□ 0.98
PTPRU-207ENST00000492954 KRT23Q9C075 422 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 ABHD16BQ9H3Z7 469 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 KAT14Q9H8E8 782 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 CNNM2Q9H8M5 875 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 CYP39A1Q9NYL5 469 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 PHF24Q9UPV7 400 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 ATP11BQ9Y2G3 1177 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 SZT2Q5T011 3432 aa21.15■□□□□ 0.98
PTPRU-207ENST00000492954 ASTN1O14525 1302 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 TNKSO95271 1327 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 SYNRGQ9UMZ2 1314 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 ADCY6O43306 1168 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 ADAMTS4O75173 837 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 CCDC144BQ3MJ40 725 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 ANKS1AQ92625 1134 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 KATNBL1Q9H079 304 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 CPVLQ9H3G5 476 aa21.14■□□□□ 0.97
PTPRU-207ENST00000492954 DDX49Q9Y6V7 483 aaKnown RBP21.14■□□□□ 0.97
PTPRU-207ENST00000492954 A0A1W2PPC1 479 aa21.13■□□□□ 0.97
PTPRU-207ENST00000492954 NFIBO00712 420 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms