RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 PHF24Q9UPV7 400 aa21.85■■□□□ 1.09
CHD1L-209ENST00000492728 MTMR7Q9Y216 660 aa21.85■■□□□ 1.09
CHD1L-209ENST00000492728 CTDP1Q9Y5B0 961 aaPredicted RBP21.85■■□□□ 1.09
CHD1L-209ENST00000492728 IRX5P78411 483 aaPredicted RBP21.84■■□□□ 1.09
CHD1L-209ENST00000492728 FAM160B2Q86V87 743 aa21.84■■□□□ 1.09
CHD1L-209ENST00000492728 MSL3Q8N5Y2 521 aaKnown RBP21.84■■□□□ 1.09
CHD1L-209ENST00000492728 CHST13Q8NET6 341 aa21.84■■□□□ 1.09
CHD1L-209ENST00000492728 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
CHD1L-209ENST00000492728 CNPY2Q9Y2B0 182 aa21.84■■□□□ 1.09
CHD1L-209ENST00000492728 SYNRGQ9UMZ2 1314 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 MCM3APO60318 1980 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 MYADML2A6NDP7 307 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 SDSP20132 328 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 CNTN2Q02246 1040 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 RRP12Q5JTH9 1297 aaKnown RBP21.83■■□□□ 1.09
CHD1L-209ENST00000492728 TTBK2Q6IQ55 1244 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 ZNF467Q7Z7K2 595 aaPredicted RBP21.83■■□□□ 1.09
CHD1L-209ENST00000492728 ANKRD35Q8N283 1001 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 KATNBL1Q9H079 304 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 RNF146Q9NTX7 359 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.83■■□□□ 1.09
CHD1L-209ENST00000492728 FBXO40Q9UH90 709 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 ZHX1Q9UKY1 873 aaPredicted RBP21.83■■□□□ 1.09
CHD1L-209ENST00000492728 PRR12Q9ULL5 1215 aa21.83■■□□□ 1.09
CHD1L-209ENST00000492728 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.09
CHD1L-209ENST00000492728 ASTN1O14525 1302 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 PLA2G6O60733 806 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 IKQ13123 557 aaPredicted RBP21.82■■□□□ 1.08
CHD1L-209ENST00000492728 LRIT3Q3SXY7 679 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 RCSD1Q6JBY9 416 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 CCDC174Q6PII3 467 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 SH3RF1Q7Z6J0 888 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 CHURC1Q8WUH1 139 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
CHD1L-209ENST00000492728 PDLIM7Q9NR12 457 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 TOMM22Q9NS69 142 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 LRRC37A2A6NM11 1700 aa21.82■■□□□ 1.08
CHD1L-209ENST00000492728 LAMA2P24043 3122 aaKnown RBP21.82■■□□□ 1.08
CHD1L-209ENST00000492728 LCTP09848 1927 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 A0A1W2PQ45 241 aaPredicted RBP21.81■■□□□ 1.08
CHD1L-209ENST00000492728 A0A1W2PQY0 241 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 MUM1L1Q5H9M0 696 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 PPP4R3BQ5MIZ7 849 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 ARMCX2Q7L311 632 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 FAM133AQ8N9E0 248 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 TMEM47Q9BQJ4 181 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 ACAD9Q9H845 621 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 COL6A3P12111 3177 aa21.81■■□□□ 1.08
CHD1L-209ENST00000492728 NEDD4P46934 1319 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 TRIM43BA6NCK2 446 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 SOWAHBA6NEL2 793 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 FDX1P10109 184 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 SLC16A2P36021 539 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 ACVR2BQ13705 512 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 CCDC96Q2M329 555 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 C1orf53Q5VUE5 145 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 RNF180Q86T96 592 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 KLHDC9Q8NEP7 349 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 TRIM43Q96BQ3 446 aaPredicted RBP21.8■■□□□ 1.08
CHD1L-209ENST00000492728 LAMA4Q16363 1823 aa21.8■■□□□ 1.08
CHD1L-209ENST00000492728 FRMPD2Q68DX3 1309 aaPredicted RBP21.8■■□□□ 1.08
CHD1L-209ENST00000492728 ALAS1P13196 640 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 CCSAPQ6IQ19 270 aaPredicted RBP21.79■■□□□ 1.08
CHD1L-209ENST00000492728 Q7L0L9 218 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 CCDC144CPQ8IYA2 1237 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 DCAF4Q8WV16 495 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 TRERF1Q96PN7 1200 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 IL25Q9H293 177 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 PRDM5Q9NQX1 630 aaPredicted RBP21.79■■□□□ 1.08
CHD1L-209ENST00000492728 TCP11L1Q9NUJ3 509 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 FAM184BQ9ULE4 1060 aa21.79■■□□□ 1.08
CHD1L-209ENST00000492728 POTEB2H3BUK9 544 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 TOP1P11387 765 aaKnown RBP21.78■■□□□ 1.08
CHD1L-209ENST00000492728 PTGS1P23219 599 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 ITGB8P26012 769 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 TLE2Q04725 743 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 CCDC144BQ3MJ40 725 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 AKNAD1Q5T1N1 836 aa21.78■■□□□ 1.08
CHD1L-209ENST00000492728 PURBQ96QR8 312 aaKnown RBP21.78■■□□□ 1.08
CHD1L-209ENST00000492728 RANBP17Q9H2T7 1088 aaKnown RBP21.78■■□□□ 1.08
CHD1L-209ENST00000492728 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.77■■□□□ 1.08
CHD1L-209ENST00000492728 PDE4AP27815 886 aa21.77■■□□□ 1.08
CHD1L-209ENST00000492728 TKFCQ3LXA3 575 aa21.77■■□□□ 1.08
CHD1L-209ENST00000492728 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
CHD1L-209ENST00000492728 BTNL9Q6UXG8 535 aa21.77■■□□□ 1.08
CHD1L-209ENST00000492728 LBHD1Q9BQE6 289 aaPredicted RBP21.77■■□□□ 1.08
CHD1L-209ENST00000492728 ABHD16BQ9H3Z7 469 aa21.77■■□□□ 1.08
CHD1L-209ENST00000492728 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
CHD1L-209ENST00000492728 CTAGE5O15320 804 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 DUSP11O75319 330 aaKnown RBP21.76■■□□□ 1.07
CHD1L-209ENST00000492728 PDHBP11177 359 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 ACLYP53396 1101 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 KCNA10Q16322 511 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 BADQ92934 168 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 UPF3AQ9H1J1 476 aaKnown RBP21.76■■□□□ 1.07
CHD1L-209ENST00000492728 GPCPD1Q9NPB8 672 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 CYP39A1Q9NYL5 469 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 PRKAG2Q9UGJ0 569 aa21.76■■□□□ 1.07
CHD1L-209ENST00000492728 CCPG1Q9ULG6 757 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms