RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 HDGFL2Q7Z4V5 671 aaPredicted RBP5.5□□□□□ -1.53
UBR4-215ENST00000492606 HELQQ8TDG4 1101 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ASIC4Q96FT7 647 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ESYT1Q9BSJ8 1104 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ZFAND3Q9H8U3 227 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 LGR6Q9HBX8 967 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 KIAA1522Q9P206 1035 aaPredicted RBP5.5□□□□□ -1.53
UBR4-215ENST00000492606 GJD2Q9UKL4 321 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ANGPTL2Q9UKU9 493 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ZNF652Q9Y2D9 606 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ADAMTS20P59510 1910 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 ANKRD33BA6NCL7 494 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 KIAA0355O15063 1070 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 ARHGAP6O43182 974 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 RAG1P15918 1043 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 TIMP2P16035 220 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 SMPD1P17405 629 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 TAGLNQ01995 201 aaKnown RBP5.49□□□□□ -1.53
UBR4-215ENST00000492606 CACNB2Q08289 660 aaPredicted RBP5.49□□□□□ -1.53
UBR4-215ENST00000492606 CLN3Q13286 438 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 GRB10Q13322 594 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 SNAPC2Q13487 334 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 SUPT20HL1Q3ZLR7 823 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 SNIP1Q8TAD8 396 aaKnown RBP5.49□□□□□ -1.53
UBR4-215ENST00000492606 TMC1Q8TDI8 760 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 KCNG4Q8TDN1 519 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 AGBL1Q96MI9 1066 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 PGPEP1Q9NXJ5 209 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 PRKAG3Q9UGI9 489 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 NSFL1CQ9UNZ2 370 aaKnown RBP5.49□□□□□ -1.53
UBR4-215ENST00000492606 NOTCH2Q04721 2471 aa5.49□□□□□ -1.53
UBR4-215ENST00000492606 ZNF536O15090 1300 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 SH3TC1Q8TE82 1336 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 H3BQ06 376 aaPredicted RBP5.48□□□□□ -1.53
UBR4-215ENST00000492606 EML1O00423 815 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 ZBTB39O15060 712 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 ARHGEF15O94989 841 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 LMNAP02545 664 aaKnown RBP5.48□□□□□ -1.53
UBR4-215ENST00000492606 ACRP10323 421 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 ERCC3P19447 782 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 PTGIRP43119 386 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 GPSM2P81274 684 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 CENPCQ03188 943 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 FOXC1Q12948 553 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 PLEKHO1Q53GL0 409 aaPredicted RBP5.48□□□□□ -1.53
UBR4-215ENST00000492606 PPM1JQ5JR12 505 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 ZNF365Q70YC5 407 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 SPRED2Q7Z698 418 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 FBXO33Q7Z6M2 555 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 GLYCTKQ8IVS8 523 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 TMEM105Q8N8V8 129 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.48□□□□□ -1.53
UBR4-215ENST00000492606 NEK9Q8TD19 979 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 COA7Q96BR5 231 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 MYO19Q96H55 970 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 ASB16Q96NS5 453 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 PRKD2Q9BZL6 878 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 NYXQ9GZU5 481 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 PCDHAC2Q9Y5I4 1007 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 TACC3Q9Y6A5 838 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 SNCAIPQ9Y6H5 919 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 V9GY48 417 aaPredicted RBP5.48□□□□□ -1.53
UBR4-215ENST00000492606 CREBBPQ92793 2442 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 COL12A1Q99715 3063 aa5.48□□□□□ -1.53
UBR4-215ENST00000492606 SETD2Q9BYW2 2564 aaPredicted RBP5.47□□□□□ -1.53
UBR4-215ENST00000492606 RPAP1Q9BWH6 1393 aaPredicted RBP5.47□□□□□ -1.53
UBR4-215ENST00000492606 NBPF19A0A087WUL8 3843 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 ZNF16P17020 682 aaPredicted RBP5.47□□□□□ -1.53
UBR4-215ENST00000492606 MPSTP25325 297 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 PMLP29590 882 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 TEAD4Q15561 434 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 SUSD4Q5VX71 490 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 GPAT2Q6NUI2 795 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
UBR4-215ENST00000492606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.53
UBR4-215ENST00000492606 PCDHGC5Q9Y5F6 944 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 ZNF804BA4D1E1 1349 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 UBN2Q6ZU65 1347 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 NAV3Q8IVL0 2385 aa5.47□□□□□ -1.53
UBR4-215ENST00000492606 NUP98P52948 1817 aa5.46□□□□□ -1.53
UBR4-215ENST00000492606 ECM29Q5VYK3 1845 aa5.46□□□□□ -1.53
UBR4-215ENST00000492606 HEG1Q9ULI3 1381 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 FZD6O60353 706 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 CLTBP09497 229 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 ARP10275 920 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 SLC5A1P13866 664 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 CCR10P46092 362 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 RIPPLY3P57055 190 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 PSMA6P60900 246 aaKnown RBP5.46□□□□□ -1.54
UBR4-215ENST00000492606 SHC2P98077 582 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 SIGLEC14Q08ET2 396 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 PPIL2Q13356 520 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 GJC2Q5T442 439 aaPredicted RBP5.46□□□□□ -1.54
UBR4-215ENST00000492606 C16orf46Q6P387 395 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 ERO1BQ86YB8 467 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 PPARGC1BQ86YN6 1023 aaKnown RBP5.46□□□□□ -1.54
UBR4-215ENST00000492606 TBC1D16Q8TBP0 767 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 ARNTL2Q8WYA1 636 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 HPS1Q92902 700 aa5.46□□□□□ -1.54
UBR4-215ENST00000492606 GRIP2Q9C0E4 1043 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms